Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT4O95628 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT4O95628 AP005117.1-201ENST00000584346 1413 ntBASIC15.59■□□□□ 0.09
CNOT4O95628 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT4O95628 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT4O95628 AL354751.1-201ENST00000412768 1863 ntBASIC15.59■□□□□ 0.09
CNOT4O95628 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CNOT4O95628 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CNOT4O95628 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT4O95628 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT4O95628 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.59■□□□□ 0.09
CNOT4O95628 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.58■□□□□ 0.09
CNOT4O95628 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT4O95628 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT4O95628 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT4O95628 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT4O95628 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.58■□□□□ 0.09
CNOT4O95628 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT4O95628 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.58■□□□□ 0.08
CNOT4O95628 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 AKR1C7P-201ENST00000305623 895 ntBASIC15.58■□□□□ 0.08
CNOT4O95628 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.58■□□□□ 0.08
CNOT4O95628 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.58■□□□□ 0.08
CNOT4O95628 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 AL590627.1-203ENST00000421194 1026 ntBASIC15.58■□□□□ 0.08
CNOT4O95628 SCARNA2-201ENST00000458748 420 ntBASIC15.58■□□□□ 0.08
CNOT4O95628 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.58■□□□□ 0.08
CNOT4O95628 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.58■□□□□ 0.08
CNOT4O95628 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.58■□□□□ 0.08
CNOT4O95628 AL355877.3-201ENST00000622820 899 ntBASIC15.58■□□□□ 0.08
CNOT4O95628 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CNOT4O95628 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.58■□□□□ 0.08
CNOT4O95628 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CNOT4O95628 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.58■□□□□ 0.08
CNOT4O95628 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CNOT4O95628 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT4O95628 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.57■□□□□ 0.08
CNOT4O95628 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CNOT4O95628 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CNOT4O95628 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.57■□□□□ 0.08
CNOT4O95628 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.57■□□□□ 0.08
CNOT4O95628 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.57■□□□□ 0.08
CNOT4O95628 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.57■□□□□ 0.08
CNOT4O95628 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CNOT4O95628 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.57■□□□□ 0.08
CNOT4O95628 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.57■□□□□ 0.08
CNOT4O95628 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CNOT4O95628 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CNOT4O95628 AD001527.2-201ENST00000622994 785 ntBASIC15.57■□□□□ 0.08
CNOT4O95628 AC117500.6-201ENST00000624871 588 ntBASIC15.57■□□□□ 0.08
CNOT4O95628 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.57■□□□□ 0.08
CNOT4O95628 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.57■□□□□ 0.08
CNOT4O95628 AP000867.4-201ENST00000641616 219 ntBASIC15.57■□□□□ 0.08
CNOT4O95628 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CNOT4O95628 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.57■□□□□ 0.08
CNOT4O95628 HLA-A-201ENST00000376802 1334 ntBASIC15.57■□□□□ 0.08
CNOT4O95628 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CNOT4O95628 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNOT4O95628 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CNOT4O95628 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.56■□□□□ 0.08
CNOT4O95628 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.56■□□□□ 0.08
CNOT4O95628 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.56■□□□□ 0.08
CNOT4O95628 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.56■□□□□ 0.08
CNOT4O95628 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.56■□□□□ 0.08
CNOT4O95628 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.56■□□□□ 0.08
CNOT4O95628 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CNOT4O95628 AC008608.2-201ENST00000606089 416 ntBASIC15.56■□□□□ 0.08
CNOT4O95628 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.56■□□□□ 0.08
CNOT4O95628 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms