Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.43■□□□□ 0.06
KDM4BO94953 AC008687.5-201ENST00000593746 558 ntBASIC15.43■□□□□ 0.06
KDM4BO94953 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.43■□□□□ 0.06
KDM4BO94953 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.43■□□□□ 0.06
KDM4BO94953 FAM87A-204ENST00000613235 858 ntBASIC15.43■□□□□ 0.06
KDM4BO94953 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.43■□□□□ 0.06
KDM4BO94953 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.43■□□□□ 0.06
KDM4BO94953 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
KDM4BO94953 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
KDM4BO94953 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
KDM4BO94953 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
KDM4BO94953 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDM4BO94953 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 MST1L-201ENST00000442552 2185 ntBASIC15.42■□□□□ 0.06
KDM4BO94953 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
KDM4BO94953 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.42■□□□□ 0.06
KDM4BO94953 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
KDM4BO94953 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
KDM4BO94953 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 FLJ16779-201ENST00000612722 7638 ntBASIC15.42■□□□□ 0.06
KDM4BO94953 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.42■□□□□ 0.06
KDM4BO94953 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.42■□□□□ 0.06
KDM4BO94953 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDM4BO94953 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
KDM4BO94953 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
KDM4BO94953 HYMAI-201ENST00000635591 3347 ntBASIC15.41■□□□□ 0.06
KDM4BO94953 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.41■□□□□ 0.06
KDM4BO94953 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.41■□□□□ 0.06
KDM4BO94953 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.41■□□□□ 0.06
KDM4BO94953 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 AC024243.1-201ENST00000609234 778 ntBASIC15.41■□□□□ 0.06
KDM4BO94953 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
KDM4BO94953 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.41■□□□□ 0.06
KDM4BO94953 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDM4BO94953 AC022898.2-201ENST00000616822 1312 ntBASIC15.41■□□□□ 0.06
KDM4BO94953 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms