Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.34■□□□□ 0.53
BEST1O76090 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BEST1O76090 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST1O76090 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST1O76090 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.33■□□□□ 0.53
BEST1O76090 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST1O76090 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
BEST1O76090 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
BEST1O76090 FZD10-202ENST00000539839 3282 ntBASIC18.33■□□□□ 0.53
BEST1O76090 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BEST1O76090 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
BEST1O76090 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BEST1O76090 RPS2P28-201ENST00000314255 741 ntBASIC18.33■□□□□ 0.52
BEST1O76090 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.33■□□□□ 0.52
BEST1O76090 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 AC073621.1-201ENST00000392730 636 ntBASIC18.33■□□□□ 0.52
BEST1O76090 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.33■□□□□ 0.52
BEST1O76090 AC092910.1-201ENST00000482027 1129 ntBASIC18.33■□□□□ 0.52
BEST1O76090 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.33■□□□□ 0.52
BEST1O76090 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.33■□□□□ 0.52
BEST1O76090 SLC25A1P1-201ENST00000528351 927 ntBASIC18.33■□□□□ 0.52
BEST1O76090 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.33■□□□□ 0.52
BEST1O76090 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.33■□□□□ 0.52
BEST1O76090 AC120114.3-201ENST00000611923 658 ntBASIC18.33■□□□□ 0.52
BEST1O76090 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.33■□□□□ 0.52
BEST1O76090 AC004706.3-202ENST00000621574 984 ntBASIC18.33■□□□□ 0.52
BEST1O76090 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.33■□□□□ 0.52
BEST1O76090 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.33■□□□□ 0.52
BEST1O76090 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.33■□□□□ 0.52
BEST1O76090 AC006504.4-201ENST00000592118 1568 ntBASIC18.33■□□□□ 0.52
BEST1O76090 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.33■□□□□ 0.52
BEST1O76090 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST1O76090 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BEST1O76090 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST1O76090 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
BEST1O76090 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST1O76090 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST1O76090 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST1O76090 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST1O76090 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST1O76090 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BEST1O76090 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST1O76090 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 LINC00982-205ENST00000420957 435 ntBASIC18.32■□□□□ 0.52
BEST1O76090 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST1O76090 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST1O76090 AC105339.3-201ENST00000560043 636 ntBASIC18.32■□□□□ 0.52
BEST1O76090 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST1O76090 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST1O76090 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST1O76090 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 BX640515.1-201ENST00000617215 977 ntBASIC18.32■□□□□ 0.52
BEST1O76090 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST1O76090 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BEST1O76090 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST1O76090 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST1O76090 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BEST1O76090 NCF1C-201ENST00000438382 1427 ntBASIC18.32■□□□□ 0.52
BEST1O76090 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST1O76090 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST1O76090 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.31■□□□□ 0.52
BEST1O76090 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.31■□□□□ 0.52
BEST1O76090 AC093909.1-201ENST00000504731 1122 ntBASIC18.31■□□□□ 0.52
BEST1O76090 IGHV3-22-201ENST00000520721 359 ntBASIC18.31■□□□□ 0.52
BEST1O76090 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST1O76090 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
BEST1O76090 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms