Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFS3O75489 LINC00265-3P-201ENST00000447588 903 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 MINOS1P3-201ENST00000457048 203 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 TOB2P1-201ENST00000469761 992 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 AC122714.2-201ENST00000502787 707 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFS3O75489 TPSP2-201ENST00000561760 610 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 AC109462.3-201ENST00000573934 613 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFS3O75489 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.47■□□□□ 0.39
NDUFS3O75489 AC069148.1-201ENST00000608741 768 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 AL139327.4-201ENST00000612362 153 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NDUFS3O75489 AC108860.2-201ENST00000562760 2183 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFS3O75489 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NDUFS3O75489 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
NDUFS3O75489 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFS3O75489 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFS3O75489 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFS3O75489 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFS3O75489 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.46■□□□□ 0.39
NDUFS3O75489 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.46■□□□□ 0.39
NDUFS3O75489 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.46■□□□□ 0.39
NDUFS3O75489 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 AP005901.3-202ENST00000581653 237 ntBASIC17.46■□□□□ 0.39
NDUFS3O75489 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.46■□□□□ 0.39
NDUFS3O75489 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NDUFS3O75489 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NDUFS3O75489 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFS3O75489 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NDUFS3O75489 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDUFS3O75489 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDUFS3O75489 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.46■□□□□ 0.38
NDUFS3O75489 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.46■□□□□ 0.38
NDUFS3O75489 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDUFS3O75489 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFS3O75489 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NDUFS3O75489 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFS3O75489 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFS3O75489 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFS3O75489 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NDUFS3O75489 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFS3O75489 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NDUFS3O75489 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 KRT17P6-201ENST00000453795 1220 ntBASIC17.45■□□□□ 0.38
NDUFS3O75489 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.45■□□□□ 0.38
NDUFS3O75489 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.45■□□□□ 0.38
NDUFS3O75489 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFS3O75489 AC111152.3-201ENST00000569699 673 ntBASIC17.45■□□□□ 0.38
NDUFS3O75489 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NDUFS3O75489 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NDUFS3O75489 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFS3O75489 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms