Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.4■□□□□ 0.38
SUPT3HO75486 VENTXP5-201ENST00000523979 775 ntBASIC17.4■□□□□ 0.38
SUPT3HO75486 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.4■□□□□ 0.38
SUPT3HO75486 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.4■□□□□ 0.38
SUPT3HO75486 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.4■□□□□ 0.38
SUPT3HO75486 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.4■□□□□ 0.38
SUPT3HO75486 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.4■□□□□ 0.38
SUPT3HO75486 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SUPT3HO75486 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.4■□□□□ 0.38
SUPT3HO75486 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SUPT3HO75486 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.4■□□□□ 0.38
SUPT3HO75486 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SUPT3HO75486 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SUPT3HO75486 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.39■□□□□ 0.37
SUPT3HO75486 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.39■□□□□ 0.37
SUPT3HO75486 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.39■□□□□ 0.37
SUPT3HO75486 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.39■□□□□ 0.37
SUPT3HO75486 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 LINC01023-201ENST00000606054 436 ntBASIC17.39■□□□□ 0.37
SUPT3HO75486 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SUPT3HO75486 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SUPT3HO75486 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 LINC01311-201ENST00000565162 1445 ntBASIC17.38■□□□□ 0.37
SUPT3HO75486 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SUPT3HO75486 BX276092.7-203ENST00000637198 1536 ntBASIC17.38■□□□□ 0.37
SUPT3HO75486 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SUPT3HO75486 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SUPT3HO75486 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.38■□□□□ 0.37
SUPT3HO75486 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.38■□□□□ 0.37
SUPT3HO75486 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SUPT3HO75486 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.38■□□□□ 0.37
SUPT3HO75486 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.38■□□□□ 0.37
SUPT3HO75486 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SUPT3HO75486 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUPT3HO75486 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SUPT3HO75486 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUPT3HO75486 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SUPT3HO75486 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SUPT3HO75486 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms