Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM3O75382 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM3O75382 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM3O75382 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM3O75382 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM3O75382 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TRIM3O75382 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM3O75382 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM3O75382 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM3O75382 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 OR6D1P-203ENST00000641209 4860 ntBASIC16.35■□□□□ 0.21
TRIM3O75382 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 POM121L3P-201ENST00000419331 1163 ntBASIC16.35■□□□□ 0.21
TRIM3O75382 KRT18P31-201ENST00000506277 1292 ntBASIC16.35■□□□□ 0.21
TRIM3O75382 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM3O75382 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM3O75382 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM3O75382 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM3O75382 BNIP3P18-201ENST00000593976 575 ntBASIC16.35■□□□□ 0.21
TRIM3O75382 AC138894.3-201ENST00000603787 634 ntBASIC16.35■□□□□ 0.21
TRIM3O75382 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM3O75382 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM3O75382 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM3O75382 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM3O75382 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM3O75382 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM3O75382 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM3O75382 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
TRIM3O75382 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM3O75382 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
TRIM3O75382 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM3O75382 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM3O75382 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM3O75382 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM3O75382 AC091304.2-201ENST00000564639 760 ntBASIC16.34■□□□□ 0.21
TRIM3O75382 AL138831.2-201ENST00000606564 490 ntBASIC16.34■□□□□ 0.21
TRIM3O75382 AL732292.2-201ENST00000609649 430 ntBASIC16.34■□□□□ 0.21
TRIM3O75382 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM3O75382 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 AC125634.1-201ENST00000438758 1403 ntBASIC16.34■□□□□ 0.21
TRIM3O75382 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM3O75382 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM3O75382 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM3O75382 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM3O75382 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms