Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF13O43567 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF13O43567 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF13O43567 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF13O43567 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 AL645929.1-201ENST00000420084 975 ntBASIC15.97■□□□□ 0.15
RNF13O43567 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF13O43567 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF13O43567 MTCL1P1-201ENST00000446207 792 ntBASIC15.97■□□□□ 0.15
RNF13O43567 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF13O43567 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF13O43567 RNF126P1-202ENST00000569893 925 ntBASIC15.97■□□□□ 0.15
RNF13O43567 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNF13O43567 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNF13O43567 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF13O43567 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF13O43567 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF13O43567 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF13O43567 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF13O43567 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF13O43567 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF13O43567 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RNF13O43567 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF13O43567 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF13O43567 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RNF13O43567 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.96■□□□□ 0.15
RNF13O43567 AC068472.1-201ENST00000474589 881 ntBASIC15.96■□□□□ 0.15
RNF13O43567 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF13O43567 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF13O43567 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF13O43567 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF13O43567 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RNF13O43567 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF13O43567 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF13O43567 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF13O43567 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF13O43567 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF13O43567 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RNF13O43567 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF13O43567 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.96■□□□□ 0.14
RNF13O43567 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.96■□□□□ 0.14
RNF13O43567 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF13O43567 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF13O43567 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.96■□□□□ 0.14
RNF13O43567 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.95■□□□□ 0.14
RNF13O43567 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RNF13O43567 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF13O43567 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 HLA-J-201ENST00000462773 1622 ntBASIC15.95■□□□□ 0.14
RNF13O43567 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF13O43567 SPDYE13P-201ENST00000445314 798 ntBASIC15.95■□□□□ 0.14
RNF13O43567 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF13O43567 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF13O43567 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 LINC00304-203ENST00000565008 1864 ntBASIC15.95■□□□□ 0.14
RNF13O43567 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF13O43567 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF13O43567 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF13O43567 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF13O43567 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms