Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRGAP3O43295 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRGAP3O43295 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
SRGAP3O43295 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SRGAP3O43295 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SRGAP3O43295 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
SRGAP3O43295 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SRGAP3O43295 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SRGAP3O43295 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.7■■□□□ 1.06
SRGAP3O43295 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
SRGAP3O43295 AF186996.4-201ENST00000467186 377 ntBASIC21.7■■□□□ 1.06
SRGAP3O43295 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.7■■□□□ 1.06
SRGAP3O43295 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.7■■□□□ 1.06
SRGAP3O43295 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.7■■□□□ 1.06
SRGAP3O43295 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.7■■□□□ 1.06
SRGAP3O43295 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SRGAP3O43295 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.7■■□□□ 1.06
SRGAP3O43295 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRGAP3O43295 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SRGAP3O43295 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.7■■□□□ 1.06
SRGAP3O43295 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.7■■□□□ 1.06
SRGAP3O43295 PP12613-201ENST00000424958 2230 ntBASIC21.7■■□□□ 1.06
SRGAP3O43295 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.69■■□□□ 1.06
SRGAP3O43295 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SRGAP3O43295 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SRGAP3O43295 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.69■■□□□ 1.06
SRGAP3O43295 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SRGAP3O43295 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.69■■□□□ 1.06
SRGAP3O43295 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.69■■□□□ 1.06
SRGAP3O43295 RPS2P1-201ENST00000434010 821 ntBASIC21.69■■□□□ 1.06
SRGAP3O43295 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.69■■□□□ 1.06
SRGAP3O43295 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.69■■□□□ 1.06
SRGAP3O43295 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.69■■□□□ 1.06
SRGAP3O43295 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.69■■□□□ 1.06
SRGAP3O43295 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.69■■□□□ 1.06
SRGAP3O43295 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.69■■□□□ 1.06
SRGAP3O43295 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SRGAP3O43295 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SRGAP3O43295 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRGAP3O43295 AL138688.1-201ENST00000624851 1594 ntBASIC21.69■■□□□ 1.06
SRGAP3O43295 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SRGAP3O43295 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.68■■□□□ 1.06
SRGAP3O43295 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.68■■□□□ 1.06
SRGAP3O43295 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.68■■□□□ 1.06
SRGAP3O43295 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SRGAP3O43295 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
SRGAP3O43295 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.68■■□□□ 1.06
SRGAP3O43295 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRGAP3O43295 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.67■■□□□ 1.06
SRGAP3O43295 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 AL135999.2-201ENST00000622438 1686 ntBASIC21.67■■□□□ 1.06
SRGAP3O43295 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.67■■□□□ 1.06
SRGAP3O43295 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.67■■□□□ 1.06
SRGAP3O43295 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.67■■□□□ 1.06
SRGAP3O43295 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms