Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.41■□□□□ 0.22
RRP8O43159 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.41■□□□□ 0.22
RRP8O43159 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RRP8O43159 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.41■□□□□ 0.22
RRP8O43159 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.41■□□□□ 0.22
RRP8O43159 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.41■□□□□ 0.22
RRP8O43159 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.41■□□□□ 0.22
RRP8O43159 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
RRP8O43159 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.41■□□□□ 0.22
RRP8O43159 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RRP8O43159 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RRP8O43159 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RRP8O43159 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.41■□□□□ 0.22
RRP8O43159 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RRP8O43159 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.4■□□□□ 0.22
RRP8O43159 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RRP8O43159 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 PTCHD3P3-201ENST00000403073 906 ntBASIC16.4■□□□□ 0.22
RRP8O43159 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.4■□□□□ 0.22
RRP8O43159 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.4■□□□□ 0.22
RRP8O43159 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 DUX4L27-201ENST00000554796 1261 ntBASIC16.4■□□□□ 0.22
RRP8O43159 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.4■□□□□ 0.22
RRP8O43159 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RRP8O43159 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
RRP8O43159 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.4■□□□□ 0.22
RRP8O43159 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RRP8O43159 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RRP8O43159 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.4■□□□□ 0.22
RRP8O43159 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
RRP8O43159 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 SIRPAP1-201ENST00000448467 1770 ntBASIC16.39■□□□□ 0.21
RRP8O43159 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.39■□□□□ 0.21
RRP8O43159 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RRP8O43159 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RRP8O43159 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
RRP8O43159 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.39■□□□□ 0.21
RRP8O43159 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.39■□□□□ 0.21
RRP8O43159 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RRP8O43159 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RRP8O43159 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.39■□□□□ 0.21
RRP8O43159 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.39■□□□□ 0.21
RRP8O43159 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RRP8O43159 AC132938.5-201ENST00000624980 1813 ntBASIC16.38■□□□□ 0.21
RRP8O43159 AC148477.5-201ENST00000625164 1645 ntBASIC16.38■□□□□ 0.21
RRP8O43159 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms