Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC22.2■■□□□ 1.14
ABCC4O15439 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ABCC4O15439 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
ABCC4O15439 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ABCC4O15439 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.2■■□□□ 1.14
ABCC4O15439 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC22.19■■□□□ 1.14
ABCC4O15439 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 AC009336.1-201ENST00000608941 1553 ntBASIC22.19■■□□□ 1.14
ABCC4O15439 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.19■■□□□ 1.14
ABCC4O15439 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.19■■□□□ 1.14
ABCC4O15439 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.19■■□□□ 1.14
ABCC4O15439 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.19■■□□□ 1.14
ABCC4O15439 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.19■■□□□ 1.14
ABCC4O15439 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.19■■□□□ 1.14
ABCC4O15439 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
ABCC4O15439 AC055717.3-201ENST00000622967 595 ntBASIC22.19■■□□□ 1.14
ABCC4O15439 AC073592.4-201ENST00000623827 446 ntBASIC22.19■■□□□ 1.14
ABCC4O15439 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.19■■□□□ 1.14
ABCC4O15439 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC22.19■■□□□ 1.14
ABCC4O15439 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ABCC4O15439 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
ABCC4O15439 AC148477.5-201ENST00000625164 1645 ntBASIC22.18■■□□□ 1.14
ABCC4O15439 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 AC003669.1-201ENST00000334569 611 ntBASIC22.18■■□□□ 1.14
ABCC4O15439 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.18■■□□□ 1.14
ABCC4O15439 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.18■■□□□ 1.14
ABCC4O15439 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.18■■□□□ 1.14
ABCC4O15439 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.18■■□□□ 1.14
ABCC4O15439 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ABCC4O15439 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ABCC4O15439 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
ABCC4O15439 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
ABCC4O15439 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCC4O15439 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.17■■□□□ 1.14
ABCC4O15439 AC046185.3-201ENST00000623228 1824 ntBASIC22.17■■□□□ 1.14
ABCC4O15439 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ABCC4O15439 KLF4P1-201ENST00000412782 1185 ntBASIC22.17■■□□□ 1.14
ABCC4O15439 SPDYE21P-201ENST00000413323 827 ntBASIC22.17■■□□□ 1.14
ABCC4O15439 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
ABCC4O15439 AL591424.1-201ENST00000442569 1213 ntBASIC22.17■■□□□ 1.14
ABCC4O15439 AC105339.3-201ENST00000560043 636 ntBASIC22.17■■□□□ 1.14
ABCC4O15439 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ABCC4O15439 BANP-227ENST00000626016 2144 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCC4O15439 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCC4O15439 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCC4O15439 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCC4O15439 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCC4O15439 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.17■■□□□ 1.14
ABCC4O15439 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.16■■□□□ 1.14
ABCC4O15439 CEP83-AS1-201ENST00000623122 2482 ntBASIC22.16■■□□□ 1.14
ABCC4O15439 AC108860.2-201ENST00000562760 2183 ntBASIC22.16■■□□□ 1.14
ABCC4O15439 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCC4O15439 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.16■■□□□ 1.14
ABCC4O15439 SIGLEC16-201ENST00000599858 1437 ntBASIC22.16■■□□□ 1.14
ABCC4O15439 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.16■■□□□ 1.14
ABCC4O15439 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.16■■□□□ 1.14
ABCC4O15439 UNC93B6-202ENST00000528242 690 ntBASIC22.16■■□□□ 1.14
ABCC4O15439 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.16■■□□□ 1.14
ABCC4O15439 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.16■■□□□ 1.14
ABCC4O15439 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.16■■□□□ 1.14
ABCC4O15439 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.16■■□□□ 1.14
ABCC4O15439 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
ABCC4O15439 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCC4O15439 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCC4O15439 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.16■■□□□ 1.14
ABCC4O15439 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCC4O15439 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms