Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC22.38■■□□□ 1.17
CHL1O00533 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.38■■□□□ 1.17
CHL1O00533 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CHL1O00533 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CHL1O00533 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.38■■□□□ 1.17
CHL1O00533 PGAM5P1-201ENST00000518923 814 ntBASIC22.38■■□□□ 1.17
CHL1O00533 OR7E47P-204ENST00000575924 449 ntBASIC22.38■■□□□ 1.17
CHL1O00533 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CHL1O00533 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.38■■□□□ 1.17
CHL1O00533 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CHL1O00533 AC016396.2-201ENST00000562575 1417 ntBASIC22.38■■□□□ 1.17
CHL1O00533 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHL1O00533 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.37■■□□□ 1.17
CHL1O00533 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CHL1O00533 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CHL1O00533 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CHL1O00533 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.37■■□□□ 1.17
CHL1O00533 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.37■■□□□ 1.17
CHL1O00533 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC22.37■■□□□ 1.17
CHL1O00533 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.37■■□□□ 1.17
CHL1O00533 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.37■■□□□ 1.17
CHL1O00533 AC140113.2-201ENST00000604370 208 ntBASIC22.37■■□□□ 1.17
CHL1O00533 AC027601.4-201ENST00000611259 610 ntBASIC22.37■■□□□ 1.17
CHL1O00533 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.37■■□□□ 1.17
CHL1O00533 AC004790.2-201ENST00000623588 572 ntBASIC22.37■■□□□ 1.17
CHL1O00533 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.37■■□□□ 1.17
CHL1O00533 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.37■■□□□ 1.17
CHL1O00533 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
CHL1O00533 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHL1O00533 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 RNF165-205ENST00000588679 2904 ntBASIC22.36■■□□□ 1.17
CHL1O00533 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.36■■□□□ 1.17
CHL1O00533 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.36■■□□□ 1.17
CHL1O00533 PAWRP1-201ENST00000451083 565 ntBASIC22.36■■□□□ 1.17
CHL1O00533 POLD2P1-201ENST00000511220 997 ntBASIC22.36■■□□□ 1.17
CHL1O00533 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CHL1O00533 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CHL1O00533 FAM197Y3-203ENST00000618346 717 ntBASIC22.36■■□□□ 1.17
CHL1O00533 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHL1O00533 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CHL1O00533 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.35■■□□□ 1.17
CHL1O00533 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.35■■□□□ 1.17
CHL1O00533 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.35■■□□□ 1.17
CHL1O00533 PRSS29P-201ENST00000440800 595 ntBASIC22.35■■□□□ 1.17
CHL1O00533 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.35■■□□□ 1.17
CHL1O00533 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
CHL1O00533 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.35■■□□□ 1.17
CHL1O00533 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CHL1O00533 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHL1O00533 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.34■■□□□ 1.17
CHL1O00533 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHL1O00533 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.34■■□□□ 1.17
CHL1O00533 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.34■■□□□ 1.17
CHL1O00533 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CHL1O00533 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC22.34■■□□□ 1.17
CHL1O00533 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.34■■□□□ 1.17
CHL1O00533 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.34■■□□□ 1.17
CHL1O00533 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.34■■□□□ 1.17
CHL1O00533 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms