Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 HTR7P1-202ENST00000624664 4411 ntBASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 AL662844.1-201ENST00000546340 181 ntBASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 AC064862.7-201ENST00000604520 867 ntBASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 FZD10-202ENST00000539839 3282 ntBASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 AL135999.2-201ENST00000622438 1686 ntBASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 AL031284.1-201ENST00000419297 478 ntBASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 AL049840.3-201ENST00000602669 611 ntBASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YJEFN3A6XGL0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 AL138688.1-201ENST00000624851 1594 ntBASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 OR7E14P-202ENST00000530490 1290 ntBASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 FAM215A-202ENST00000632077 792 ntBASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 AC107918.4-202ENST00000641623 219 ntBASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms