Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 EMBP1-201ENST00000458200 901 ntBASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 KRT126P-201ENST00000549467 1181 ntBASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRBV5-4A0A0C4DH59 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-4A0A0C4DH59 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 SCARNA2-201ENST00000458748 420 ntBASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 AL691432.3-201ENST00000621860 400 ntBASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 AP001094.4-201ENST00000579008 2176 ntBASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV5-4A0A0C4DH59 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-4A0A0C4DH59 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-4A0A0C4DH59 EGFEM1P-202ENST00000431685 1563 ntBASIC17.15■□□□□ 0.34
TRBV5-4A0A0C4DH59 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms