Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV1A0A0A0MS02 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 AL136038.3-201ENST00000561909 1096 ntBASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 AC124864.1-201ENST00000623408 392 ntBASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRGV1A0A0A0MS02 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 HLA-J-201ENST00000462773 1622 ntBASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 AC011840.4-201ENST00000578471 627 ntBASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 AC090616.6-201ENST00000582640 721 ntBASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 LINC01451-201ENST00000623792 534 ntBASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 AL121956.5-201ENST00000625261 221 ntBASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRGV1A0A0A0MS02 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV1A0A0A0MS02 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms