Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB1Q9Y5G3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 AC138932.3-201ENST00000567634 1902 ntBASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 AC010501.1-201ENST00000606270 1962 ntBASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGB1Q9Y5G3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGB1Q9Y5G3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGB1Q9Y5G3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGB1Q9Y5G3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGB1Q9Y5G3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGB1Q9Y5G3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDHGB1Q9Y5G3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 AC022211.4-201ENST00000625094 2161 ntBASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB1Q9Y5G3 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.16■■□□□ 1.14
PCDHGB1Q9Y5G3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB1Q9Y5G3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB1Q9Y5G3 ABHD17AP4-201ENST00000411545 909 ntBASIC22.16■■□□□ 1.14
PCDHGB1Q9Y5G3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB1Q9Y5G3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PCDHGB1Q9Y5G3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGB1Q9Y5G3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGB1Q9Y5G3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGB1Q9Y5G3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGB1Q9Y5G3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGB1Q9Y5G3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGB1Q9Y5G3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHGB1Q9Y5G3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGB1Q9Y5G3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGB1Q9Y5G3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGB1Q9Y5G3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGB1Q9Y5G3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGB1Q9Y5G3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHGB1Q9Y5G3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
PCDHGB1Q9Y5G3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
PCDHGB1Q9Y5G3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHGB1Q9Y5G3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGB1Q9Y5G3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHGB1Q9Y5G3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 LINC00543-201ENST00000567234 1845 ntBASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 MIR3665-201ENST00000578708 105 ntBASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 MIR6090-201ENST00000622481 60 ntBASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGB1Q9Y5G3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGB1Q9Y5G3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PCDHGB1Q9Y5G3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGB1Q9Y5G3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGB1Q9Y5G3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGB1Q9Y5G3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGB1Q9Y5G3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGB1Q9Y5G3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGB1Q9Y5G3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGB1Q9Y5G3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGB1Q9Y5G3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGB1Q9Y5G3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGB1Q9Y5G3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHGB1Q9Y5G3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms