Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF170Q96K19 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF170Q96K19 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF170Q96K19 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF170Q96K19 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF170Q96K19 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF170Q96K19 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF170Q96K19 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF170Q96K19 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RNF170Q96K19 CLDN5-201ENST00000403084 2357 ntBASIC21.45■■□□□ 1.02
RNF170Q96K19 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF170Q96K19 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF170Q96K19 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF170Q96K19 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.44■■□□□ 1.02
RNF170Q96K19 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF170Q96K19 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF170Q96K19 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF170Q96K19 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF170Q96K19 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF170Q96K19 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RNF170Q96K19 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF170Q96K19 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF170Q96K19 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF170Q96K19 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF170Q96K19 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF170Q96K19 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF170Q96K19 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF170Q96K19 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF170Q96K19 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF170Q96K19 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF170Q96K19 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF170Q96K19 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF170Q96K19 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF170Q96K19 ABHD17AP4-201ENST00000411545 909 ntBASIC21.41■■□□□ 1.02
RNF170Q96K19 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF170Q96K19 DUX4L11-201ENST00000611504 1267 ntBASIC21.41■■□□□ 1.02
RNF170Q96K19 DUX4L12-201ENST00000614593 1267 ntBASIC21.41■■□□□ 1.02
RNF170Q96K19 DUX4L14-201ENST00000621227 1267 ntBASIC21.41■■□□□ 1.02
RNF170Q96K19 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF170Q96K19 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF170Q96K19 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF170Q96K19 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF170Q96K19 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF170Q96K19 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L13-201ENST00000554103 1267 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L15-201ENST00000611059 1267 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L23-201ENST00000615195 1269 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L24-201ENST00000617576 1269 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L22-201ENST00000618238 1269 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L20-201ENST00000619712 1269 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L21-201ENST00000622058 1269 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L10-201ENST00000622460 1267 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 DUX4L25-201ENST00000624915 1269 ntBASIC21.4■■□□□ 1.02
RNF170Q96K19 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF170Q96K19 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF170Q96K19 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF170Q96K19 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF170Q96K19 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF170Q96K19 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
RNF170Q96K19 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF170Q96K19 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RNF170Q96K19 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RNF170Q96K19 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF170Q96K19 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF170Q96K19 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF170Q96K19 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.37■■□□□ 1.01
RNF170Q96K19 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF170Q96K19 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF170Q96K19 AC079834.2-201ENST00000609776 1949 ntBASIC21.37■■□□□ 1.01
RNF170Q96K19 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF170Q96K19 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF170Q96K19 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF170Q96K19 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF170Q96K19 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RNF170Q96K19 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF170Q96K19 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
RNF170Q96K19 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF170Q96K19 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF170Q96K19 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF170Q96K19 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF170Q96K19 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.35■■□□□ 1.01
RNF170Q96K19 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF170Q96K19 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RNF170Q96K19 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF170Q96K19 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF170Q96K19 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF170Q96K19 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF170Q96K19 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF170Q96K19 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF170Q96K19 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF170Q96K19 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.32■■□□□ 1
RNF170Q96K19 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.32■■□□□ 1
RNF170Q96K19 DUSP8P4-201ENST00000399538 1761 ntBASIC21.32■■□□□ 1
RNF170Q96K19 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF170Q96K19 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
RNF170Q96K19 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF170Q96K19 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.32■■□□□ 1
RNF170Q96K19 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.31■■□□□ 1
RNF170Q96K19 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF170Q96K19 ERN1-208ENST00000606895 2068 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms