Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC170Q8IYT3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC170Q8IYT3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
CCDC170Q8IYT3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC170Q8IYT3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.1■■□□□ 1.77
CCDC170Q8IYT3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC170Q8IYT3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CCDC170Q8IYT3 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.09■■□□□ 1.77
CCDC170Q8IYT3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CCDC170Q8IYT3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.08■■□□□ 1.77
CCDC170Q8IYT3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC170Q8IYT3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CCDC170Q8IYT3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC170Q8IYT3 AC022211.4-201ENST00000625094 2161 ntBASIC26.07■■□□□ 1.76
CCDC170Q8IYT3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC170Q8IYT3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC170Q8IYT3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.07■■□□□ 1.76
CCDC170Q8IYT3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC170Q8IYT3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.06■■□□□ 1.76
CCDC170Q8IYT3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC170Q8IYT3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC170Q8IYT3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.05■■□□□ 1.76
CCDC170Q8IYT3 AC096887.2-201ENST00000623443 1957 ntBASIC26.05■■□□□ 1.76
CCDC170Q8IYT3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC170Q8IYT3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.03■■□□□ 1.76
CCDC170Q8IYT3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.03■■□□□ 1.76
CCDC170Q8IYT3 AC008813.1-201ENST00000536597 885 ntBASIC26.03■■□□□ 1.76
CCDC170Q8IYT3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC170Q8IYT3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC170Q8IYT3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.02■■□□□ 1.76
CCDC170Q8IYT3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC170Q8IYT3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC170Q8IYT3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC170Q8IYT3 AC138932.3-201ENST00000567634 1902 ntBASIC26.02■■□□□ 1.76
CCDC170Q8IYT3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.01■■□□□ 1.75
CCDC170Q8IYT3 LINC01971-201ENST00000617888 1048 ntBASIC26.01■■□□□ 1.75
CCDC170Q8IYT3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC170Q8IYT3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CCDC170Q8IYT3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26■■□□□ 1.75
CCDC170Q8IYT3 AC148477.6-201ENST00000623746 465 ntBASIC25.99■■□□□ 1.75
CCDC170Q8IYT3 MIR219A2-201ENST00000608502 1504 ntBASIC25.98■■□□□ 1.75
CCDC170Q8IYT3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CCDC170Q8IYT3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
CCDC170Q8IYT3 AL139125.2-201ENST00000623134 1869 ntBASIC25.98■■□□□ 1.75
CCDC170Q8IYT3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC170Q8IYT3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC170Q8IYT3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L13-201ENST00000554103 1267 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L15-201ENST00000611059 1267 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L23-201ENST00000615195 1269 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L24-201ENST00000617576 1269 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L22-201ENST00000618238 1269 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L20-201ENST00000619712 1269 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L21-201ENST00000622058 1269 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L10-201ENST00000622460 1267 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 DUX4L25-201ENST00000624915 1269 ntBASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.97■■□□□ 1.75
CCDC170Q8IYT3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC170Q8IYT3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC170Q8IYT3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC170Q8IYT3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC170Q8IYT3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC170Q8IYT3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC170Q8IYT3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
CCDC170Q8IYT3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC170Q8IYT3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCDC170Q8IYT3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC170Q8IYT3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.93■■□□□ 1.74
CCDC170Q8IYT3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CCDC170Q8IYT3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC170Q8IYT3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC170Q8IYT3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.92■■□□□ 1.74
CCDC170Q8IYT3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC170Q8IYT3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms