Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 SUF23tG(GCC)J2 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)MtG(GCC)M 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)O1tG(GCC)O1 71 nt5.72□□□□□ -1.49
UFD1P53044 SUF17tG(GCC)O2 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)P1tG(GCC)P1 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)P2tG(GCC)P2 71 nt5.72□□□□□ -1.49
UFD1P53044 PMT3YOR321W 2262 nt5.72□□□□□ -1.49
UFD1P53044 STT3YGL022W 2157 nt5.72□□□□□ -1.49
UFD1P53044 PAT1YCR077C 2391 nt5.71□□□□□ -1.5
UFD1P53044 YPT1YFL038C 621 nt5.71□□□□□ -1.5
UFD1P53044 SWD1YAR003W 1281 nt5.71□□□□□ -1.5
UFD1P53044 YOR111WYOR111W 699 nt5.71□□□□□ -1.5
UFD1P53044 DFR1YOR236W 636 nt5.71□□□□□ -1.5
UFD1P53044 YBR113WYBR113W 483 nt5.71□□□□□ -1.5
UFD1P53044 GEF1YJR040W 2340 nt5.71□□□□□ -1.5
UFD1P53044 PPM2YOL141W 2088 nt5.71□□□□□ -1.5
UFD1P53044 ARG81YML099C 2643 nt5.71□□□□□ -1.5
UFD1P53044 RGD1YBR260C 2001 nt5.7□□□□□ -1.5
UFD1P53044 CYS4YGR155W 1524 nt5.7□□□□□ -1.5
UFD1P53044 HED1YDR014W-A 489 nt5.7□□□□□ -1.5
UFD1P53044 AGX1YFL030W 1158 nt5.7□□□□□ -1.5
UFD1P53044 YKL018C-AYKL018C-A 300 nt5.7□□□□□ -1.5
UFD1P53044 LDB7YBL006C 543 nt5.7□□□□□ -1.5
UFD1P53044 ASR1YPR093C 867 nt5.7□□□□□ -1.5
UFD1P53044 COQ1YBR003W 1422 nt5.7□□□□□ -1.5
UFD1P53044 DOT1YDR440W 1749 nt5.7□□□□□ -1.5
UFD1P53044 HEM1YDR232W 1647 nt5.7□□□□□ -1.5
UFD1P53044 MPH3YJR160C 1809 nt5.69□□□□□ -1.5
UFD1P53044 BIO3YNR058W 1443 nt5.69□□□□□ -1.5
UFD1P53044 LIA1YJR070C 978 nt5.69□□□□□ -1.5
UFD1P53044 LSG1YGL099W 1923 nt5.69□□□□□ -1.5
UFD1P53044 RMD9YGL107C 1941 nt5.68□□□□□ -1.5
UFD1P53044 PCS60YBR222C 1632 nt5.68□□□□□ -1.5
UFD1P53044 HOC1YJR075W 1191 nt5.68□□□□□ -1.5
UFD1P53044 MIA40YKL195W 1212 nt5.68□□□□□ -1.5
UFD1P53044 YKL077WYKL077W 1179 nt5.67□□□□□ -1.5
UFD1P53044 SUB2YDL084W 1341 nt5.67□□□□□ -1.5
UFD1P53044 ATG36YJL185C 882 nt5.66□□□□□ -1.5
UFD1P53044 YBR124WYBR124W 360 nt5.66□□□□□ -1.5
UFD1P53044 EDE1YBL047C 4146 nt5.66□□□□□ -1.5
UFD1P53044 UTR2YEL040W 1404 nt5.65□□□□□ -1.5
UFD1P53044 GPD1YDL022W 1176 nt5.65□□□□□ -1.5
UFD1P53044 FBA1YKL060C 1080 nt5.65□□□□□ -1.5
UFD1P53044 BZZ1YHR114W 1902 nt5.65□□□□□ -1.51
UFD1P53044 COX10YPL172C 1389 nt5.65□□□□□ -1.51
UFD1P53044 YDR387CYDR387C 1668 nt5.64□□□□□ -1.51
UFD1P53044 RFC4YOL094C 972 nt5.64□□□□□ -1.51
UFD1P53044 HEM2YGL040C 1029 nt5.63□□□□□ -1.51
UFD1P53044 RPP1YHR062C 882 nt5.63□□□□□ -1.51
UFD1P53044 HSP150YJL159W 1242 nt5.63□□□□□ -1.51
UFD1P53044 DID2YKR035W-A 615 nt5.63□□□□□ -1.51
UFD1P53044 RIX7YLL034C 2514 nt5.62□□□□□ -1.51
UFD1P53044 ASF1YJL115W 840 nt5.62□□□□□ -1.51
UFD1P53044 PEX13YLR191W 1161 nt5.62□□□□□ -1.51
UFD1P53044 RNH1YMR234W 1047 nt5.62□□□□□ -1.51
UFD1P53044 YNL092WYNL092W 1203 nt5.62□□□□□ -1.51
UFD1P53044 MRPL23YOR150W 492 nt5.62□□□□□ -1.51
UFD1P53044 YPL250W-AYPL250W-A 288 nt5.62□□□□□ -1.51
UFD1P53044 RBS1YDL189W 1374 nt5.62□□□□□ -1.51
UFD1P53044 CRP1YHR146W 1398 nt5.62□□□□□ -1.51
UFD1P53044 DUG1YFR044C 1446 nt5.62□□□□□ -1.51
UFD1P53044 TEL2YGR099W 2067 nt5.61□□□□□ -1.51
UFD1P53044 KEL1YHR158C 3495 nt5.61□□□□□ -1.51
UFD1P53044 SQT1YIR012W 1296 nt5.61□□□□□ -1.51
UFD1P53044 YJR146WYJR146W 354 nt5.61□□□□□ -1.51
UFD1P53044 YNL120CYNL120C 486 nt5.61□□□□□ -1.51
UFD1P53044 CWC27YPL064C 906 nt5.61□□□□□ -1.51
UFD1P53044 FMP40YPL222W 2067 nt5.61□□□□□ -1.51
UFD1P53044 THI2YBR240C 1353 nt5.61□□□□□ -1.51
UFD1P53044 STE13YOR219C 2796 nt5.61□□□□□ -1.51
UFD1P53044 ESC8YOL017W 2145 nt5.6□□□□□ -1.51
UFD1P53044 CRH1YGR189C 1524 nt5.6□□□□□ -1.51
UFD1P53044 MSY1YPL097W 1479 nt5.6□□□□□ -1.51
UFD1P53044 YML133CYML133C 4125 nt5.6□□□□□ -1.51
UFD1P53044 FMO1YHR176W 1299 nt5.6□□□□□ -1.51
UFD1P53044 MRP51YPL118W 1035 nt5.6□□□□□ -1.51
UFD1P53044 YOL036WYOL036W 2286 nt5.6□□□□□ -1.51
UFD1P53044 YHK8YHR048W 1545 nt5.59□□□□□ -1.51
UFD1P53044 XBP1YIL101C 1944 nt5.59□□□□□ -1.51
UFD1P53044 MRPL35YDR322W 1104 nt5.59□□□□□ -1.51
UFD1P53044 DMA1YHR115C 1251 nt5.59□□□□□ -1.51
UFD1P53044 ICS3YJL077C 396 nt5.59□□□□□ -1.51
UFD1P53044 YLR123CYLR123C 330 nt5.59□□□□□ -1.51
UFD1P53044 KSH1YNL024C-A 219 nt5.59□□□□□ -1.51
UFD1P53044 MOD5YOR274W 1287 nt5.59□□□□□ -1.51
UFD1P53044 YPL257WYPL257W 582 nt5.59□□□□□ -1.51
UFD1P53044 IMA5YJL216C 1746 nt5.59□□□□□ -1.51
UFD1P53044 TPO3YPR156C 1869 nt5.58□□□□□ -1.52
UFD1P53044 PPM1YDR435C 987 nt5.58□□□□□ -1.52
UFD1P53044 YRB2YIL063C 984 nt5.58□□□□□ -1.52
UFD1P53044 CIS3YJL158C 684 nt5.58□□□□□ -1.52
UFD1P53044 YKL102CYKL102C 306 nt5.58□□□□□ -1.52
UFD1P53044 SRY1YKL218C 981 nt5.58□□□□□ -1.52
UFD1P53044 YLR312CYLR312C 1197 nt5.58□□□□□ -1.52
UFD1P53044 TRP5YGL026C 2124 nt5.57□□□□□ -1.52
UFD1P53044 CRZ1YNL027W 2037 nt5.57□□□□□ -1.52
UFD1P53044 PEX3YDR329C 1326 nt5.57□□□□□ -1.52
UFD1P53044 YFR006WYFR006W 1608 nt5.57□□□□□ -1.52
UFD1P53044 FAL1YDR021W 1200 nt5.57□□□□□ -1.52
UFD1P53044 DUS4YLR405W 1104 nt5.57□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms