Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 tG(GCC)P2tG(GCC)P2 71 nt5.12□□□□□ -1.59
VPS55P47111 LYS1YIR034C 1122 nt5.12□□□□□ -1.59
VPS55P47111 YJR146WYJR146W 354 nt5.12□□□□□ -1.59
VPS55P47111 MIA40YKL195W 1212 nt5.12□□□□□ -1.59
VPS55P47111 YMR122CYMR122C 375 nt5.12□□□□□ -1.59
VPS55P47111 RUF23RUF23 254 nt5.12□□□□□ -1.59
VPS55P47111 YNR014WYNR014W 639 nt5.12□□□□□ -1.59
VPS55P47111 DFR1YOR236W 636 nt5.12□□□□□ -1.59
VPS55P47111 YPL257WYPL257W 582 nt5.12□□□□□ -1.59
VPS55P47111 UIP5YKR044W 1332 nt5.12□□□□□ -1.59
VPS55P47111 GPD2YOL059W 1323 nt5.12□□□□□ -1.59
VPS55P47111 OSW2YLR054C 2175 nt5.11□□□□□ -1.59
VPS55P47111 PPH22YDL188C 1134 nt5.11□□□□□ -1.59
VPS55P47111 ERP2YAL007C 648 nt5.11□□□□□ -1.59
VPS55P47111 SCS7YMR272C 1155 nt5.11□□□□□ -1.59
VPS55P47111 DAL4YIR028W 1908 nt5.11□□□□□ -1.59
VPS55P47111 EDE1YBL047C 4146 nt5.1□□□□□ -1.59
VPS55P47111 CDC1YDR182W 1476 nt5.1□□□□□ -1.59
VPS55P47111 CUP2YGL166W 678 nt5.1□□□□□ -1.59
VPS55P47111 YIL055CYIL055C 1884 nt5.1□□□□□ -1.59
VPS55P47111 COX16YJL003W 357 nt5.1□□□□□ -1.59
VPS55P47111 ACS1YAL054C 2142 nt5.1□□□□□ -1.59
VPS55P47111 KSH1YNL024C-A 219 nt5.1□□□□□ -1.59
VPS55P47111 ZWF1YNL241C 1518 nt5.1□□□□□ -1.59
VPS55P47111 LAG2YOL025W 1983 nt5.1□□□□□ -1.59
VPS55P47111 RIO1YOR119C 1455 nt5.1□□□□□ -1.59
VPS55P47111 YPL250W-AYPL250W-A 288 nt5.1□□□□□ -1.59
VPS55P47111 POP1YNL221C 2628 nt5.09□□□□□ -1.59
VPS55P47111 YDR187CYDR187C 519 nt5.09□□□□□ -1.59
VPS55P47111 YUR1YJL139C 1287 nt5.09□□□□□ -1.59
VPS55P47111 TAE1YBR261C 699 nt5.09□□□□□ -1.59
VPS55P47111 TDH2YJR009C 999 nt5.08□□□□□ -1.6
VPS55P47111 OPI8YKR035C 642 nt5.08□□□□□ -1.6
VPS55P47111 MSO1YNR049C 633 nt5.08□□□□□ -1.6
VPS55P47111 PEX31YGR004W 1389 nt5.07□□□□□ -1.6
VPS55P47111 RRP9YPR137W 1722 nt5.07□□□□□ -1.6
VPS55P47111 YDR415CYDR415C 1125 nt5.07□□□□□ -1.6
VPS55P47111 YKR032WYKR032W 315 nt5.07□□□□□ -1.6
VPS55P47111 DID2YKR035W-A 615 nt5.07□□□□□ -1.6
VPS55P47111 OGG1YML060W 1131 nt5.07□□□□□ -1.6
VPS55P47111 MIP1YOR330C 3765 nt5.07□□□□□ -1.6
VPS55P47111 PRY3YJL078C 2646 nt5.07□□□□□ -1.6
VPS55P47111 CSC1YLR241W 2349 nt5.06□□□□□ -1.6
VPS55P47111 FYV1YDR024W 486 nt5.06□□□□□ -1.6
VPS55P47111 ARE2YNR019W 1929 nt5.05□□□□□ -1.6
VPS55P47111 YMR279CYMR279C 1623 nt5.05□□□□□ -1.6
VPS55P47111 snR82snR82 268 nt5.05□□□□□ -1.6
VPS55P47111 BIM1YER016W 1035 nt5.05□□□□□ -1.6
VPS55P47111 YPT1YFL038C 621 nt5.05□□□□□ -1.6
VPS55P47111 YGR127WYGR127W 939 nt5.05□□□□□ -1.6
VPS55P47111 MDE1YJR024C 735 nt5.05□□□□□ -1.6
VPS55P47111 IMD1YAR073W 1212 nt5.05□□□□□ -1.6
VPS55P47111 YNL120CYNL120C 486 nt5.05□□□□□ -1.6
VPS55P47111 TOS6YNL300W 309 nt5.05□□□□□ -1.6
VPS55P47111 SGF29YCL010C 780 nt5.05□□□□□ -1.6
VPS55P47111 GEF1YJR040W 2340 nt5.05□□□□□ -1.6
VPS55P47111 HEM1YDR232W 1647 nt5.05□□□□□ -1.6
VPS55P47111 YDL085C-AYDL085C-A 207 nt5.04□□□□□ -1.6
VPS55P47111 SRL2YLR082C 1179 nt5.04□□□□□ -1.6
VPS55P47111 LDB16YCL005W 771 nt5.04□□□□□ -1.6
VPS55P47111 PTC3YBL056W 1407 nt5.04□□□□□ -1.6
VPS55P47111 ATG22YCL038C 1587 nt5.04□□□□□ -1.6
VPS55P47111 YGR054WYGR054W 1929 nt5.03□□□□□ -1.6
VPS55P47111 PEX3YDR329C 1326 nt5.03□□□□□ -1.6
VPS55P47111 HXK2YGL253W 1461 nt5.03□□□□□ -1.6
VPS55P47111 YEL075W-AYEL075W-A 612 nt5.03□□□□□ -1.6
VPS55P47111 MSP1YGR028W 1089 nt5.03□□□□□ -1.6
VPS55P47111 YJR107WYJR107W 987 nt5.03□□□□□ -1.6
VPS55P47111 YLR463CYLR463C 552 nt5.03□□□□□ -1.6
VPS55P47111 RPL5YPL131W 894 nt5.03□□□□□ -1.6
VPS55P47111 ECM31YBR176W 939 nt5.03□□□□□ -1.6
VPS55P47111 RGD1YBR260C 2001 nt5.02□□□□□ -1.61
VPS55P47111 YEN1YER041W 2280 nt5.02□□□□□ -1.61
VPS55P47111 GTO3YMR251W 1101 nt5.02□□□□□ -1.61
VPS55P47111 RNH201YNL072W 924 nt5.02□□□□□ -1.61
VPS55P47111 PTC4YBR125C 1182 nt5.02□□□□□ -1.61
VPS55P47111 MLS1YNL117W 1665 nt5.02□□□□□ -1.61
VPS55P47111 ECM27YJR106W 2178 nt5.01□□□□□ -1.61
VPS55P47111 CIR2YOR356W 1896 nt5.01□□□□□ -1.61
VPS55P47111 THI4YGR144W 981 nt5.01□□□□□ -1.61
VPS55P47111 SPG1YGR236C 288 nt5.01□□□□□ -1.61
VPS55P47111 MPC2YHR162W 390 nt5.01□□□□□ -1.61
VPS55P47111 YML018CYML018C 1182 nt5.01□□□□□ -1.61
VPS55P47111 FPR3YML074C 1236 nt5.01□□□□□ -1.61
VPS55P47111 ADH5YBR145W 1056 nt5.01□□□□□ -1.61
VPS55P47111 KTR5YNL029C 1569 nt5□□□□□ -1.61
VPS55P47111 DYS1YHR068W 1164 nt5□□□□□ -1.61
VPS55P47111 YJR084WYJR084W 1272 nt5□□□□□ -1.61
VPS55P47111 FBA1YKL060C 1080 nt5□□□□□ -1.61
VPS55P47111 MEH1YKR007W 555 nt5□□□□□ -1.61
VPS55P47111 YMR295CYMR295C 594 nt5□□□□□ -1.61
VPS55P47111 MRPL10YNL284C 969 nt5□□□□□ -1.61
VPS55P47111 PPT1YGR123C 1542 nt5□□□□□ -1.61
VPS55P47111 MSY1YPL097W 1479 nt5□□□□□ -1.61
VPS55P47111 ARG81YML099C 2643 nt4.99□□□□□ -1.61
VPS55P47111 VHT1YGR065C 1782 nt4.99□□□□□ -1.61
VPS55P47111 SLX5YDL013W 1860 nt4.99□□□□□ -1.61
VPS55P47111 SUF5tG(CCC)O 72 nt4.99□□□□□ -1.61
VPS55P47111 SQT1YIR012W 1296 nt4.99□□□□□ -1.61
VPS55P47111 AIM24YJR080C 1185 nt4.99□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 119.9 ms