Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 CIT2YCR005C 1383 nt6.75□□□□□ -1.33 RIP-Chip
PUB1P32588 YDL119CYDL119C 924 nt6.75□□□□□ -1.33
PUB1P32588 YPR177CYPR177C 372 nt6.75□□□□□ -1.33
PUB1P32588 ALR1YOL130W 2580 nt6.74□□□□□ -1.33
PUB1P32588 CKI1YLR133W 1749 nt6.74□□□□□ -1.33
PUB1P32588 PCL9YDL179W 915 nt6.74□□□□□ -1.33 RIP-Chip
PUB1P32588 DIN7YDR263C 1293 nt6.74□□□□□ -1.33
PUB1P32588 WSS1YHR134W 810 nt6.74□□□□□ -1.33
PUB1P32588 HCR1YLR192C 798 nt6.74□□□□□ -1.33
PUB1P32588 CTL1YMR180C 963 nt6.74□□□□□ -1.33
PUB1P32588 RMD8YFR048W 1989 nt6.74□□□□□ -1.33
PUB1P32588 ATP2YJR121W 1536 nt6.74□□□□□ -1.33
PUB1P32588 SLI1YGR212W 1407 nt6.74□□□□□ -1.33
PUB1P32588 MSS51YLR203C 1311 nt6.74□□□□□ -1.33 RIP-Chip
PUB1P32588 FRA1YLL029W 2250 nt6.73□□□□□ -1.33
PUB1P32588 GET3YDL100C 1065 nt6.73□□□□□ -1.33
PUB1P32588 ARI1YGL157W 1044 nt6.73□□□□□ -1.33
PUB1P32588 YKL091CYKL091C 933 nt6.73□□□□□ -1.33 RIP-Chip
PUB1P32588 DID2YKR035W-A 615 nt6.73□□□□□ -1.33
PUB1P32588 PHA2YNL316C 1005 nt6.73□□□□□ -1.33
PUB1P32588 YAH1YPL252C 519 nt6.73□□□□□ -1.33 RIP-Chip
PUB1P32588 TOD6YBL054W 1578 nt6.73□□□□□ -1.33
PUB1P32588 SEC24YIL109C 2781 nt6.73□□□□□ -1.33
PUB1P32588 FRT1YOR324C 1809 nt6.72□□□□□ -1.33
PUB1P32588 CDC10YCR002C 969 nt6.72□□□□□ -1.33
PUB1P32588 MAK32YCR019W 1092 nt6.72□□□□□ -1.33
PUB1P32588 SHR3YDL212W 633 nt6.72□□□□□ -1.33 RIP-Chip
PUB1P32588 YDR327WYDR327W 327 nt6.72□□□□□ -1.33
PUB1P32588 UTR5YEL035C 501 nt6.72□□□□□ -1.33
PUB1P32588 ADK2YER170W 678 nt6.72□□□□□ -1.33
PUB1P32588 REV7YIL139C 738 nt6.72□□□□□ -1.33
PUB1P32588 DAL80YKR034W 810 nt6.72□□□□□ -1.33
PUB1P32588 RUF5-1RUF5-1 710 nt6.72□□□□□ -1.33
PUB1P32588 RUF5-2RUF5-2 710 nt6.72□□□□□ -1.33
PUB1P32588 OST3YOR085W 1053 nt6.72□□□□□ -1.33 RIP-Chip
PUB1P32588 CSG2YBR036C 1233 nt6.72□□□□□ -1.33 RIP-Chip
PUB1P32588 CAN1YEL063C 1773 nt6.72□□□□□ -1.33 RIP-Chip
PUB1P32588 YCR006CYCR006C 474 nt6.71□□□□□ -1.34
PUB1P32588 TRP1YDR007W 675 nt6.71□□□□□ -1.34
PUB1P32588 YHL045WYHL045W 348 nt6.71□□□□□ -1.34
PUB1P32588 PRY2YKR013W 990 nt6.71□□□□□ -1.34 RIP-Chip
PUB1P32588 YML034C-AYML034C-A 399 nt6.71□□□□□ -1.34 RIP-Chip
PUB1P32588 MFT1YML062C 1179 nt6.71□□□□□ -1.34
PUB1P32588 SRT1YMR101C 1032 nt6.71□□□□□ -1.34
PUB1P32588 YOR020W-AYOR020W-A 273 nt6.71□□□□□ -1.34 RIP-Chip
PUB1P32588 TFB6YOR352W 1032 nt6.71□□□□□ -1.34 RIP-Chip
PUB1P32588 YDC1YPL087W 954 nt6.71□□□□□ -1.34 RIP-Chip
PUB1P32588 FLC2YAL053W 2352 nt6.71□□□□□ -1.34
PUB1P32588 STE3YKL178C 1413 nt6.7□□□□□ -1.34
PUB1P32588 tL(UAA)B1tL(UAA)B1 84 nt6.7□□□□□ -1.34
PUB1P32588 tL(UAA)B2tL(UAA)B2 84 nt6.7□□□□□ -1.34
PUB1P32588 tL(UAA)DtL(UAA)D 84 nt6.7□□□□□ -1.34
PUB1P32588 SUP51tL(UAA)J 84 nt6.7□□□□□ -1.34
PUB1P32588 tL(UAA)KtL(UAA)K 84 nt6.7□□□□□ -1.34
PUB1P32588 tL(UAA)LtL(UAA)L 84 nt6.7□□□□□ -1.34
PUB1P32588 tL(UAA)NtL(UAA)N 84 nt6.7□□□□□ -1.34
PUB1P32588 APT1YML022W 564 nt6.7□□□□□ -1.34 RIP-Chip
PUB1P32588 AVO2YMR068W 1281 nt6.7□□□□□ -1.34
PUB1P32588 RNH1YMR234W 1047 nt6.7□□□□□ -1.34
PUB1P32588 ALG5YPL227C 1005 nt6.7□□□□□ -1.34
PUB1P32588 ADA2YDR448W 1305 nt6.7□□□□□ -1.34
PUB1P32588 MCM5YLR274W 2328 nt6.7□□□□□ -1.34
PUB1P32588 LUC7YDL087C 786 nt6.69□□□□□ -1.34
PUB1P32588 SPO16YHR153C 597 nt6.69□□□□□ -1.34
PUB1P32588 YIL168WYIL168W 384 nt6.69□□□□□ -1.34
PUB1P32588 KAE1YKR038C 1161 nt6.69□□□□□ -1.34
PUB1P32588 YOR268CYOR268C 399 nt6.69□□□□□ -1.34
PUB1P32588 TEP1YNL128W 1305 nt6.69□□□□□ -1.34
PUB1P32588 GDH1YOR375C 1365 nt6.69□□□□□ -1.34
PUB1P32588 TOM71YHR117W 1920 nt6.68□□□□□ -1.34
PUB1P32588 YJL047C-AYJL047C-A 135 nt6.68□□□□□ -1.34 RIP-Chip
PUB1P32588 CDC8YJR057W 651 nt6.68□□□□□ -1.34
PUB1P32588 HYM1YKL189W 1200 nt6.68□□□□□ -1.34
PUB1P32588 YLL047WYLL047W 384 nt6.68□□□□□ -1.34
PUB1P32588 INP54YOL065C 1155 nt6.68□□□□□ -1.34 RIP-Chip
PUB1P32588 YOL106WYOL106W 354 nt6.68□□□□□ -1.34
PUB1P32588 GPI2YPL076W 843 nt6.68□□□□□ -1.34 RIP-Chip
PUB1P32588 COX11YPL132W 903 nt6.68□□□□□ -1.34 RIP-Chip
PUB1P32588 YNL295WYNL295W 1575 nt6.68□□□□□ -1.34
PUB1P32588 CTF3YLR381W 2202 nt6.67□□□□□ -1.34
PUB1P32588 MRPL15YLR312W-A 762 nt6.67□□□□□ -1.34
PUB1P32588 VMA6YLR447C 1038 nt6.67□□□□□ -1.34 RIP-Chip
PUB1P32588 YML101C-AYML101C-A 318 nt6.67□□□□□ -1.34
PUB1P32588 SRL4YPL033C 846 nt6.67□□□□□ -1.34
PUB1P32588 ERG24YNL280C 1317 nt6.67□□□□□ -1.34
PUB1P32588 YDR222WYDR222W 1248 nt6.66□□□□□ -1.34 RIP-Chip
PUB1P32588 LSM6YDR378C 261 nt6.66□□□□□ -1.34 RIP-Chip
PUB1P32588 YGL260WYGL260W 231 nt6.66□□□□□ -1.34
PUB1P32588 OPI1YHL020C 1215 nt6.66□□□□□ -1.34
PUB1P32588 SPO12YHR152W 522 nt6.66□□□□□ -1.34
PUB1P32588 DCG1YIR030C 735 nt6.66□□□□□ -1.34
PUB1P32588 PPA2YMR267W 933 nt6.66□□□□□ -1.34
PUB1P32588 YNR001W-AYNR001W-A 219 nt6.66□□□□□ -1.34
PUB1P32588 RAS1YOR101W 930 nt6.66□□□□□ -1.34 RIP-Chip
PUB1P32588 RRI1YDL216C 1323 nt6.66□□□□□ -1.34
PUB1P32588 MLS1YNL117W 1665 nt6.65□□□□□ -1.34
PUB1P32588 PMA2YPL036W 2844 nt6.65□□□□□ -1.34
PUB1P32588 YDL114WYDL114W 927 nt6.65□□□□□ -1.34
PUB1P32588 MTQ2YDR140W 666 nt6.65□□□□□ -1.34
PUB1P32588 EDC2YER035W 438 nt6.65□□□□□ -1.34 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 167.2 ms