Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 IRC11YOR013W 471 nt6.82□□□□□ -1.32
RAD3P06839 YBR113WYBR113W 483 nt6.82□□□□□ -1.32
RAD3P06839 MTC5YDR128W 3447 nt6.82□□□□□ -1.32
RAD3P06839 SAL1YNL083W 1485 nt6.81□□□□□ -1.32
RAD3P06839 YDL177CYDL177C 513 nt6.81□□□□□ -1.32
RAD3P06839 ILV6YCL009C 930 nt6.81□□□□□ -1.32
RAD3P06839 NUP49YGL172W 1419 nt6.81□□□□□ -1.32
RAD3P06839 NMT1YLR195C 1368 nt6.81□□□□□ -1.32
RAD3P06839 MRC1YCL061C 3291 nt6.8□□□□□ -1.32
RAD3P06839 GPI11YDR302W 660 nt6.8□□□□□ -1.32
RAD3P06839 YSC83YHR017W 1158 nt6.8□□□□□ -1.32
RAD3P06839 YKR032WYKR032W 315 nt6.8□□□□□ -1.32
RAD3P06839 AVO2YMR068W 1281 nt6.8□□□□□ -1.32
RAD3P06839 TAF9YMR236W 474 nt6.8□□□□□ -1.32
RAD3P06839 STB5YHR178W 2232 nt6.8□□□□□ -1.32
RAD3P06839 YDR514CYDR514C 1452 nt6.79□□□□□ -1.32
RAD3P06839 YDR415CYDR415C 1125 nt6.79□□□□□ -1.32
RAD3P06839 YIL077CYIL077C 963 nt6.79□□□□□ -1.32
RAD3P06839 YMR252CYMR252C 405 nt6.79□□□□□ -1.32
RAD3P06839 HEM1YDR232W 1647 nt6.79□□□□□ -1.32
RAD3P06839 tG(GCC)BtG(GCC)B 71 nt6.78□□□□□ -1.32
RAD3P06839 SUF16tG(GCC)C 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)D1tG(GCC)D1 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)D2tG(GCC)D2 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)EtG(GCC)E 71 nt6.78□□□□□ -1.32
RAD3P06839 SUF20tG(GCC)F1 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)F2tG(GCC)F2 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)G1tG(GCC)G1 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)G2tG(GCC)G2 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)J1tG(GCC)J1 71 nt6.78□□□□□ -1.32
RAD3P06839 SUF23tG(GCC)J2 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)MtG(GCC)M 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)O1tG(GCC)O1 71 nt6.78□□□□□ -1.32
RAD3P06839 SUF17tG(GCC)O2 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)P1tG(GCC)P1 71 nt6.78□□□□□ -1.32
RAD3P06839 tG(GCC)P2tG(GCC)P2 71 nt6.78□□□□□ -1.32
RAD3P06839 GCG1YER163C 699 nt6.78□□□□□ -1.32
RAD3P06839 NAS6YGR232W 687 nt6.78□□□□□ -1.32
RAD3P06839 LSC1YOR142W 990 nt6.78□□□□□ -1.32
RAD3P06839 BZZ1YHR114W 1902 nt6.78□□□□□ -1.32
RAD3P06839 SUF5tG(CCC)O 72 nt6.77□□□□□ -1.33
RAD3P06839 UBP13YBL067C 2244 nt6.77□□□□□ -1.33
RAD3P06839 QNS1YHR074W 2145 nt6.76□□□□□ -1.33
RAD3P06839 SAC6YDR129C 1929 nt6.76□□□□□ -1.33
RAD3P06839 LSG1YGL099W 1923 nt6.76□□□□□ -1.33
RAD3P06839 PMT3YOR321W 2262 nt6.75□□□□□ -1.33
RAD3P06839 NTE1YML059C 5040 nt6.75□□□□□ -1.33
RAD3P06839 HSP150YJL159W 1242 nt6.75□□□□□ -1.33
RAD3P06839 YMR034CYMR034C 1305 nt6.75□□□□□ -1.33
RAD3P06839 YPT1YFL038C 621 nt6.74□□□□□ -1.33
RAD3P06839 HEM2YGL040C 1029 nt6.74□□□□□ -1.33
RAD3P06839 TFG2YGR005C 1203 nt6.74□□□□□ -1.33
RAD3P06839 PTC7YHR076W 1032 nt6.74□□□□□ -1.33
RAD3P06839 YLR361C-AYLR361C-A 297 nt6.74□□□□□ -1.33
RAD3P06839 PAT1YCR077C 2391 nt6.74□□□□□ -1.33
RAD3P06839 YEL020CYEL020C 1683 nt6.74□□□□□ -1.33
RAD3P06839 STT3YGL022W 2157 nt6.74□□□□□ -1.33
RAD3P06839 AIM3YBR108W 2844 nt6.73□□□□□ -1.33
RAD3P06839 ERG8YMR220W 1356 nt6.73□□□□□ -1.33
RAD3P06839 SKN1YGR143W 2316 nt6.73□□□□□ -1.33
RAD3P06839 PYK2YOR347C 1521 nt6.72□□□□□ -1.33
RAD3P06839 MRPS28YDR337W 861 nt6.72□□□□□ -1.33
RAD3P06839 YLL056CYLL056C 897 nt6.72□□□□□ -1.33
RAD3P06839 YHR020WYHR020W 2067 nt6.72□□□□□ -1.33
RAD3P06839 UTR2YEL040W 1404 nt6.71□□□□□ -1.34
RAD3P06839 YEL075W-AYEL075W-A 612 nt6.71□□□□□ -1.34
RAD3P06839 OM45YIL136W 1182 nt6.71□□□□□ -1.34
RAD3P06839 FBA1YKL060C 1080 nt6.71□□□□□ -1.34
RAD3P06839 YLR463CYLR463C 552 nt6.71□□□□□ -1.34
RAD3P06839 MRPS12YNR036C 462 nt6.71□□□□□ -1.34
RAD3P06839 RPS28AYOR167C 204 nt6.71□□□□□ -1.34
RAD3P06839 ICP55YER078C 1536 nt6.71□□□□□ -1.34
RAD3P06839 SKI2YLR398C 3864 nt6.7□□□□□ -1.34
RAD3P06839 PRI1YIR008C 1230 nt6.7□□□□□ -1.34
RAD3P06839 PSR2YLR019W 1194 nt6.7□□□□□ -1.34
RAD3P06839 DFR1YOR236W 636 nt6.7□□□□□ -1.34
RAD3P06839 MOD5YOR274W 1287 nt6.7□□□□□ -1.34
RAD3P06839 CDC1YDR182W 1476 nt6.7□□□□□ -1.34
RAD3P06839 IVY1YDR229W 1362 nt6.69□□□□□ -1.34
RAD3P06839 CRP1YHR146W 1398 nt6.69□□□□□ -1.34
RAD3P06839 MSC3YLR219W 2187 nt6.69□□□□□ -1.34
RAD3P06839 GPA1YHR005C 1419 nt6.69□□□□□ -1.34
RAD3P06839 YGL102CYGL102C 429 nt6.69□□□□□ -1.34
RAD3P06839 ICT1YLR099C 1185 nt6.69□□□□□ -1.34
RAD3P06839 YMR122CYMR122C 375 nt6.69□□□□□ -1.34
RAD3P06839 OSW2YLR054C 2175 nt6.68□□□□□ -1.34
RAD3P06839 RRP9YPR137W 1722 nt6.68□□□□□ -1.34
RAD3P06839 TSR2YLR435W 618 nt6.68□□□□□ -1.34
RAD3P06839 EDE1YBL047C 4146 nt6.68□□□□□ -1.34
RAD3P06839 PFK2YMR205C 2880 nt6.67□□□□□ -1.34
RAD3P06839 YML018CYML018C 1182 nt6.67□□□□□ -1.34
RAD3P06839 YNL092WYNL092W 1203 nt6.67□□□□□ -1.34
RAD3P06839 MIA40YKL195W 1212 nt6.66□□□□□ -1.34
RAD3P06839 SMX3YPR182W 261 nt6.66□□□□□ -1.34
RAD3P06839 MCM6YGL201C 3054 nt6.66□□□□□ -1.34
RAD3P06839 PPM2YOL141W 2088 nt6.65□□□□□ -1.34
RAD3P06839 SQT1YIR012W 1296 nt6.65□□□□□ -1.34
RAD3P06839 SWD1YAR003W 1281 nt6.65□□□□□ -1.34
RAD3P06839 YLR312CYLR312C 1197 nt6.65□□□□□ -1.34
RAD3P06839 RNH1YMR234W 1047 nt6.65□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 91.7 ms