Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD6O75340 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD6O75340 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD6O75340 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.52■□□□□ 0.88
PDCD6O75340 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD6O75340 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
PDCD6O75340 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PDCD6O75340 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD6O75340 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD6O75340 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD6O75340 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD6O75340 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD6O75340 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD6O75340 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD6O75340 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.51■□□□□ 0.87
PDCD6O75340 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.5■□□□□ 0.87
PDCD6O75340 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDCD6O75340 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD6O75340 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.5■□□□□ 0.87
PDCD6O75340 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PDCD6O75340 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PDCD6O75340 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.5■□□□□ 0.87
PDCD6O75340 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD6O75340 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD6O75340 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.49■□□□□ 0.87
PDCD6O75340 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD6O75340 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD6O75340 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD6O75340 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.49■□□□□ 0.87
PDCD6O75340 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.49■□□□□ 0.87
PDCD6O75340 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD6O75340 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD6O75340 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD6O75340 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD6O75340 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD6O75340 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.48■□□□□ 0.87
PDCD6O75340 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD6O75340 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.47■□□□□ 0.87
PDCD6O75340 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD6O75340 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD6O75340 AL359258.2-201ENST00000564063 1566 ntBASIC20.46■□□□□ 0.87
PDCD6O75340 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD6O75340 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.46■□□□□ 0.87
PDCD6O75340 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PDCD6O75340 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD6O75340 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD6O75340 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD6O75340 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD6O75340 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD6O75340 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD6O75340 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD6O75340 HLA-V-202ENST00000446817 847 ntBASIC20.45■□□□□ 0.86
PDCD6O75340 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD6O75340 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
PDCD6O75340 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD6O75340 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD6O75340 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD6O75340 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD6O75340 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD6O75340 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD6O75340 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD6O75340 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD6O75340 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD6O75340 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.44■□□□□ 0.86
PDCD6O75340 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PDCD6O75340 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD6O75340 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.44■□□□□ 0.86
PDCD6O75340 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD6O75340 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD6O75340 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD6O75340 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD6O75340 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.43■□□□□ 0.86
PDCD6O75340 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PDCD6O75340 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDCD6O75340 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.42■□□□□ 0.86
PDCD6O75340 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.42■□□□□ 0.86
PDCD6O75340 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD6O75340 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDCD6O75340 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD6O75340 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.42■□□□□ 0.86
PDCD6O75340 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD6O75340 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PDCD6O75340 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD6O75340 ZNRF2P2-203ENST00000454624 420 ntBASIC20.41■□□□□ 0.86
PDCD6O75340 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.41■□□□□ 0.86
PDCD6O75340 AL359504.2-201ENST00000605506 1601 ntBASIC20.41■□□□□ 0.86
PDCD6O75340 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.41■□□□□ 0.86
PDCD6O75340 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD6O75340 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD6O75340 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD6O75340 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD6O75340 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
PDCD6O75340 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
PDCD6O75340 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PDCD6O75340 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDCD6O75340 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDCD6O75340 AC142381.3-201ENST00000568208 1670 ntBASIC20.39■□□□□ 0.86
PDCD6O75340 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.39■□□□□ 0.86
PDCD6O75340 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDCD6O75340 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms