Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK2O00526 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK2O00526 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK2O00526 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK2O00526 AL359258.2-201ENST00000564063 1566 ntBASIC19.54■□□□□ 0.72
UPK2O00526 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK2O00526 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.54■□□□□ 0.72
UPK2O00526 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK2O00526 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK2O00526 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK2O00526 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK2O00526 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK2O00526 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.53■□□□□ 0.72
UPK2O00526 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK2O00526 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK2O00526 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
UPK2O00526 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK2O00526 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
UPK2O00526 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK2O00526 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.51■□□□□ 0.71
UPK2O00526 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK2O00526 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK2O00526 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.51■□□□□ 0.71
UPK2O00526 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK2O00526 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK2O00526 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UPK2O00526 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK2O00526 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK2O00526 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UPK2O00526 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UPK2O00526 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK2O00526 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UPK2O00526 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK2O00526 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK2O00526 AL359504.2-201ENST00000605506 1601 ntBASIC19.48■□□□□ 0.71
UPK2O00526 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UPK2O00526 ABHD17AP4-201ENST00000411545 909 ntBASIC19.48■□□□□ 0.71
UPK2O00526 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
UPK2O00526 CR559946.2-201ENST00000623684 991 ntBASIC19.48■□□□□ 0.71
UPK2O00526 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK2O00526 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
UPK2O00526 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK2O00526 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.48■□□□□ 0.71
UPK2O00526 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK2O00526 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.47■□□□□ 0.71
UPK2O00526 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK2O00526 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
UPK2O00526 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.46■□□□□ 0.71
UPK2O00526 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.46■□□□□ 0.71
UPK2O00526 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK2O00526 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPK2O00526 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK2O00526 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UPK2O00526 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK2O00526 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPK2O00526 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK2O00526 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK2O00526 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
UPK2O00526 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPK2O00526 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK2O00526 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.43■□□□□ 0.7
UPK2O00526 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UPK2O00526 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UPK2O00526 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.43■□□□□ 0.7
UPK2O00526 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.43■□□□□ 0.7
UPK2O00526 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.43■□□□□ 0.7
UPK2O00526 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK2O00526 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK2O00526 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK2O00526 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPK2O00526 AC126177.7-201ENST00000547904 679 ntBASIC19.42■□□□□ 0.7
UPK2O00526 MIR3648-2-201ENST00000581792 180 ntBASIC19.42■□□□□ 0.7
UPK2O00526 MIR3648-1-201ENST00000615959 180 ntBASIC19.42■□□□□ 0.7
UPK2O00526 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UPK2O00526 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
UPK2O00526 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UPK2O00526 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK2O00526 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK2O00526 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK2O00526 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK2O00526 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK2O00526 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.41■□□□□ 0.7
UPK2O00526 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.41■□□□□ 0.7
UPK2O00526 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.41■□□□□ 0.7
UPK2O00526 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.41■□□□□ 0.7
UPK2O00526 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
UPK2O00526 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK2O00526 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.4■□□□□ 0.7
UPK2O00526 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK2O00526 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.39■□□□□ 0.7
UPK2O00526 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
UPK2O00526 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms