Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LINC00473A8K010 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00473A8K010 AL359258.2-201ENST00000564063 1566 ntBASIC19.83■□□□□ 0.77
LINC00473A8K010 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC00473A8K010 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.83■□□□□ 0.77
LINC00473A8K010 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00473A8K010 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00473A8K010 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LINC00473A8K010 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00473A8K010 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.83■□□□□ 0.76
LINC00473A8K010 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.82■□□□□ 0.76
LINC00473A8K010 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.82■□□□□ 0.76
LINC00473A8K010 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00473A8K010 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.82■□□□□ 0.76
LINC00473A8K010 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00473A8K010 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00473A8K010 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00473A8K010 CR559946.2-201ENST00000623684 991 ntBASIC19.81■□□□□ 0.76
LINC00473A8K010 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00473A8K010 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00473A8K010 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00473A8K010 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00473A8K010 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
LINC00473A8K010 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00473A8K010 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.8■□□□□ 0.76
LINC00473A8K010 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00473A8K010 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00473A8K010 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00473A8K010 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00473A8K010 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LINC00473A8K010 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00473A8K010 AL359504.2-201ENST00000605506 1601 ntBASIC19.79■□□□□ 0.76
LINC00473A8K010 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LINC00473A8K010 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00473A8K010 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00473A8K010 ABHD17AP4-201ENST00000411545 909 ntBASIC19.78■□□□□ 0.76
LINC00473A8K010 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.78■□□□□ 0.76
LINC00473A8K010 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00473A8K010 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.78■□□□□ 0.76
LINC00473A8K010 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00473A8K010 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00473A8K010 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00473A8K010 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
LINC00473A8K010 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00473A8K010 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.77■□□□□ 0.76
LINC00473A8K010 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LINC00473A8K010 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.77■□□□□ 0.76
LINC00473A8K010 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LINC00473A8K010 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00473A8K010 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00473A8K010 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LINC00473A8K010 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LINC00473A8K010 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00473A8K010 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LINC00473A8K010 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC00473A8K010 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00473A8K010 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00473A8K010 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
LINC00473A8K010 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00473A8K010 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00473A8K010 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00473A8K010 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00473A8K010 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00473A8K010 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00473A8K010 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00473A8K010 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.74■□□□□ 0.75
LINC00473A8K010 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LINC00473A8K010 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00473A8K010 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
LINC00473A8K010 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LINC00473A8K010 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00473A8K010 AC096887.2-201ENST00000623443 1957 ntBASIC19.74■□□□□ 0.75
LINC00473A8K010 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00473A8K010 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00473A8K010 MIR3648-2-201ENST00000581792 180 ntBASIC19.73■□□□□ 0.75
LINC00473A8K010 MIR3648-1-201ENST00000615959 180 ntBASIC19.73■□□□□ 0.75
LINC00473A8K010 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LINC00473A8K010 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.73■□□□□ 0.75
LINC00473A8K010 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00473A8K010 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LINC00473A8K010 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.72■□□□□ 0.75
LINC00473A8K010 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00473A8K010 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LINC00473A8K010 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC00473A8K010 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LINC00473A8K010 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LINC00473A8K010 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00473A8K010 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.71■□□□□ 0.75
LINC00473A8K010 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00473A8K010 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LINC00473A8K010 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00473A8K010 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00473A8K010 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms