Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV3A0A0B4J244 AC010501.1-201ENST00000606270 1962 ntBASIC19.59■□□□□ 0.73
TRAV3A0A0B4J244 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAV3A0A0B4J244 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV3A0A0B4J244 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV3A0A0B4J244 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV3A0A0B4J244 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV3A0A0B4J244 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV3A0A0B4J244 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV3A0A0B4J244 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV3A0A0B4J244 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV3A0A0B4J244 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV3A0A0B4J244 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV3A0A0B4J244 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV3A0A0B4J244 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRAV3A0A0B4J244 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV3A0A0B4J244 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV3A0A0B4J244 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAV3A0A0B4J244 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV3A0A0B4J244 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV3A0A0B4J244 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 AL359258.2-201ENST00000564063 1566 ntBASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.55■□□□□ 0.72
TRAV3A0A0B4J244 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV3A0A0B4J244 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV3A0A0B4J244 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV3A0A0B4J244 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV3A0A0B4J244 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV3A0A0B4J244 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV3A0A0B4J244 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV3A0A0B4J244 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV3A0A0B4J244 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV3A0A0B4J244 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV3A0A0B4J244 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV3A0A0B4J244 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV3A0A0B4J244 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
TRAV3A0A0B4J244 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV3A0A0B4J244 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV3A0A0B4J244 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV3A0A0B4J244 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
TRAV3A0A0B4J244 AL359504.2-201ENST00000605506 1601 ntBASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 CR559946.2-201ENST00000623684 991 ntBASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV3A0A0B4J244 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRAV3A0A0B4J244 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV3A0A0B4J244 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV3A0A0B4J244 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV3A0A0B4J244 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 ABHD17AP4-201ENST00000411545 909 ntBASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 AC096887.2-201ENST00000623443 1957 ntBASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRAV3A0A0B4J244 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV3A0A0B4J244 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms