Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX11Q9Y5W9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.33■□□□□ 0.37
SNX11Q9Y5W9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNX11Q9Y5W9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.33■□□□□ 0.37
SNX11Q9Y5W9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNX11Q9Y5W9 AL353593.2-201ENST00000602529 1483 ntBASIC17.33■□□□□ 0.37
SNX11Q9Y5W9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AP006288.1-201ENST00000446065 395 ntBASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 DUTP2-201ENST00000519164 463 ntBASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC092865.6-201ENST00000642101 219 ntBASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 NOC2LP2-201ENST00000407594 1944 ntBASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC132938.5-201ENST00000624980 1813 ntBASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
SNX11Q9Y5W9 AC148477.5-201ENST00000625164 1645 ntBASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 MIR4751-201ENST00000578027 74 ntBASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 AL049757.1-201ENST00000616842 1596 ntBASIC17.32■□□□□ 0.36
SNX11Q9Y5W9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC002310.6-201ENST00000624451 1377 ntBASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 KRT18P28-201ENST00000453838 1332 ntBASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC108073.2-201ENST00000464002 357 ntBASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC018845.2-201ENST00000568326 409 ntBASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX11Q9Y5W9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms