Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 AC011840.4-201ENST00000578471 627 ntBASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 AL353801.3-201ENST00000609898 542 ntBASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA11Q9Y5H2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGA11Q9Y5H2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AC005332.1-201ENST00000577698 1310 ntBASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 COX5BP2-201ENST00000392354 334 ntBASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 BX276092.5-203ENST00000456199 560 ntBASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 FAM86EP-206ENST00000510506 987 ntBASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AL121672.3-201ENST00000608644 468 ntBASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AC046158.3-201ENST00000624947 2558 ntBASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA11Q9Y5H2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms