Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 AL136379.1-201ENST00000623471 2642 ntBASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 AL590627.1-203ENST00000421194 1026 ntBASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA4Q9Y5G9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 AKR1C7P-201ENST00000305623 895 ntBASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 SAPCD2P3-201ENST00000455031 850 ntBASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 AL391001.1-201ENST00000602747 715 ntBASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 TCAF2P1-201ENST00000291129 2421 ntBASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA4Q9Y5G9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 AL354751.1-201ENST00000412768 1863 ntBASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 ABALON-201ENST00000629058 1903 ntBASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 PMS2P1-201ENST00000431037 1228 ntBASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 AC009712.1-201ENST00000564938 316 ntBASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 GPR32P1-201ENST00000601788 811 ntBASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 AC117500.6-201ENST00000624871 588 ntBASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 AL662844.4-201ENST00000606367 2838 ntBASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA4Q9Y5G9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms