Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 AL391005.1-201ENST00000623953 2435 ntBASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF11Q9Y3C5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 LINC01238-205ENST00000567549 1107 ntBASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RNF11Q9Y3C5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 KRT18P21-201ENST00000515767 1272 ntBASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 PCDHB19P-201ENST00000570871 2371 ntBASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF11Q9Y3C5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 AC096633.1-201ENST00000422446 749 ntBASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 TSPY22P-201ENST00000427496 604 ntBASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF11Q9Y3C5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms