Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 DUTP2-201ENST00000519164 463 ntBASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 AC243562.1-201ENST00000560672 389 ntBASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 AC009118.2-201ENST00000613275 655 ntBASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3H4Q9UPT8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 CU639417.3-201ENST00000624240 1404 ntBASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3H4Q9UPT8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 ACTG1P4-201ENST00000425123 1122 ntBASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 RBPMS2P1-201ENST00000437762 623 ntBASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 AC069120.2-201ENST00000524091 540 ntBASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3H4Q9UPT8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 AL135744.1-201ENST00000565098 629 ntBASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 RARRES2P8-201ENST00000566335 367 ntBASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 AC084121.4-201ENST00000641598 221 ntBASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 AL645728.2-201ENST00000641974 660 ntBASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 AF228730.8-201ENST00000642140 221 ntBASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms