Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 ABCD1P5-201ENST00000445663 754 ntBASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 AC139887.3-201ENST00000568585 713 ntBASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 AC006538.3-201ENST00000612495 578 ntBASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 FAM215A-202ENST00000632077 792 ntBASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 HNRNPDP1-201ENST00000439535 754 ntBASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 MIR7706-201ENST00000613747 67 ntBASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 GNAS-203ENST00000306120 1878 ntBASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA1Q9UND3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 AC005332.8-201ENST00000622750 2735 ntBASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 MIR940-201ENST00000401276 94 ntBASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 RPL13AP23-201ENST00000480739 586 ntBASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 SART3-203ENST00000546611 1184 ntBASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms