Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDE1Q9NXR1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.01■□□□□ 0.31
NDE1Q9NXR1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17■□□□□ 0.31
NDE1Q9NXR1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 AC009949.1-201ENST00000623048 1830 ntBASIC17■□□□□ 0.31
NDE1Q9NXR1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17■□□□□ 0.31
NDE1Q9NXR1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
NDE1Q9NXR1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17■□□□□ 0.31
NDE1Q9NXR1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NDE1Q9NXR1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 AC142086.2-201ENST00000569753 217 ntBASIC17■□□□□ 0.31
NDE1Q9NXR1 AL109923.1-201ENST00000618799 583 ntBASIC17■□□□□ 0.31
NDE1Q9NXR1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NDE1Q9NXR1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17■□□□□ 0.31
NDE1Q9NXR1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17■□□□□ 0.31
NDE1Q9NXR1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17■□□□□ 0.31
NDE1Q9NXR1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NDE1Q9NXR1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NDE1Q9NXR1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 MIR4674-201ENST00000582457 87 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms