Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.02■□□□□ 0.63
NLRC4Q9NPP4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.02■□□□□ 0.63
NLRC4Q9NPP4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLRC4Q9NPP4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 AL671277.2-201ENST00000458060 996 ntBASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NLRC4Q9NPP4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 RCN1P1-201ENST00000400413 996 ntBASIC19■□□□□ 0.63
NLRC4Q9NPP4 AL645929.1-201ENST00000420084 975 ntBASIC19■□□□□ 0.63
NLRC4Q9NPP4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19■□□□□ 0.63
NLRC4Q9NPP4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19■□□□□ 0.63
NLRC4Q9NPP4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 DUX4L26-201ENST00000489078 1255 ntBASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 AL139327.4-201ENST00000612362 153 ntBASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NLRC4Q9NPP4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms