Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CA15P1-201ENST00000481698 905 ntBASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SND1-IT1Q9HBX3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 LINC00304-203ENST00000565008 1864 ntBASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 MIR935-201ENST00000401179 91 ntBASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 C1QBPP2-201ENST00000528754 825 ntBASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 AC006058.3-201ENST00000606217 1069 ntBASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 DGCR10-201ENST00000609839 495 ntBASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 FLJ38576-201ENST00000623820 2459 ntBASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
SND1-IT1Q9HBX3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.76□□□□□ -0.53
SND1-IT1Q9HBX3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms