Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 AC018470.1-201ENST00000624790 3129 ntBASIC20.39■□□□□ 0.85
SH2D4AQ9H788 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 AC020763.4-201ENST00000623414 4170 ntBASIC20.38■□□□□ 0.85
SH2D4AQ9H788 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 AC097637.2-201ENST00000624096 1997 ntBASIC20.38■□□□□ 0.85
SH2D4AQ9H788 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 IGHV3-65-201ENST00000523210 341 ntBASIC20.38■□□□□ 0.85
SH2D4AQ9H788 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 AL805961.1-202ENST00000641562 540 ntBASIC20.38■□□□□ 0.85
SH2D4AQ9H788 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH2D4AQ9H788 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 GPR89P-201ENST00000407924 1495 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 CRYGEP-201ENST00000412192 528 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 UPF3AP3-201ENST00000420996 769 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 AC004832.2-201ENST00000426397 482 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 MIR3687-2-201ENST00000577708 61 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 MIR3687-1-201ENST00000614492 61 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 NOC2LP1-202ENST00000452600 2235 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 AC138028.4-201ENST00000564984 1845 ntBASIC20.37■□□□□ 0.85
SH2D4AQ9H788 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2D4AQ9H788 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.36■□□□□ 0.85
SH2D4AQ9H788 PRSS29P-201ENST00000440800 595 ntBASIC20.36■□□□□ 0.85
SH2D4AQ9H788 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 AC108073.2-201ENST00000464002 357 ntBASIC20.36■□□□□ 0.85
SH2D4AQ9H788 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 MIR4751-201ENST00000578027 74 ntBASIC20.36■□□□□ 0.85
SH2D4AQ9H788 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH2D4AQ9H788 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms