Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 AC004408.2-201ENST00000623613 2777 ntBASIC19.05■□□□□ 0.64
HIPK3Q9H422 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 AL590787.1-201ENST00000568856 1315 ntBASIC19.04■□□□□ 0.64
HIPK3Q9H422 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.04■□□□□ 0.64
HIPK3Q9H422 ACTG1P4-201ENST00000425123 1122 ntBASIC19.04■□□□□ 0.64
HIPK3Q9H422 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 TIMM8BP1-201ENST00000452384 211 ntBASIC19.04■□□□□ 0.64
HIPK3Q9H422 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 AC069262.1-201ENST00000539058 672 ntBASIC19.04■□□□□ 0.64
HIPK3Q9H422 AC093520.2-201ENST00000561830 333 ntBASIC19.04■□□□□ 0.64
HIPK3Q9H422 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIPK3Q9H422 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HIPK3Q9H422 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 AL627223.1-201ENST00000416693 442 ntBASIC19.03■□□□□ 0.64
HIPK3Q9H422 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 ADH5P3-201ENST00000433842 1137 ntBASIC19.03■□□□□ 0.64
HIPK3Q9H422 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 RNA5SP421-201ENST00000516864 134 ntBASIC19.03■□□□□ 0.64
HIPK3Q9H422 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 ACTL9-202ENST00000612068 1252 ntBASIC19.03■□□□□ 0.64
HIPK3Q9H422 AC009093.7-201ENST00000623853 1223 ntBASIC19.03■□□□□ 0.64
HIPK3Q9H422 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIPK3Q9H422 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.03■□□□□ 0.64
HIPK3Q9H422 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 AC067863.1-201ENST00000494933 530 ntBASIC19.02■□□□□ 0.64
HIPK3Q9H422 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.02■□□□□ 0.64
HIPK3Q9H422 AC015911.4-201ENST00000588022 1070 ntBASIC19.02■□□□□ 0.64
HIPK3Q9H422 AJ011932.1-201ENST00000621707 465 ntBASIC19.02■□□□□ 0.64
HIPK3Q9H422 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIPK3Q9H422 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
HIPK3Q9H422 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HIPK3Q9H422 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms