Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SSBP3Q9BWW4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.65□□□□□ -0.07
SSBP3Q9BWW4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SSBP3Q9BWW4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 AL356309.3-201ENST00000624132 1934 ntBASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 MRPL3P1-201ENST00000400109 1033 ntBASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSBP3Q9BWW4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 AC079776.4-201ENST00000511039 504 ntBASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 AP000867.4-201ENST00000641616 219 ntBASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 AC067852.2-201ENST00000590513 2313 ntBASIC14.63□□□□□ -0.07
SSBP3Q9BWW4 SIRPAP1-201ENST00000448467 1770 ntBASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSBP3Q9BWW4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms