Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PKP4Q99569 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.06■□□□□ 0.32
PKP4Q99569 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PKP4Q99569 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PKP4Q99569 KRT18P56-201ENST00000507275 550 ntBASIC17.06■□□□□ 0.32
PKP4Q99569 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.06■□□□□ 0.32
PKP4Q99569 PRELID1P1-202ENST00000567272 903 ntBASIC17.06■□□□□ 0.32
PKP4Q99569 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PKP4Q99569 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.06■□□□□ 0.32
PKP4Q99569 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.06■□□□□ 0.32
PKP4Q99569 AL591684.3-201ENST00000605187 298 ntBASIC17.06■□□□□ 0.32
PKP4Q99569 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.06■□□□□ 0.32
PKP4Q99569 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.06■□□□□ 0.32
PKP4Q99569 AC012313.10-201ENST00000623509 926 ntBASIC17.06■□□□□ 0.32
PKP4Q99569 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PKP4Q99569 AC141586.5-201ENST00000624546 2050 ntBASIC17.06■□□□□ 0.32
PKP4Q99569 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP4Q99569 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP4Q99569 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PKP4Q99569 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP4Q99569 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP4Q99569 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PKP4Q99569 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP4Q99569 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 MYCLP1-201ENST00000372451 1075 ntBASIC17.05■□□□□ 0.32
PKP4Q99569 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.05■□□□□ 0.32
PKP4Q99569 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP4Q99569 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.05■□□□□ 0.32
PKP4Q99569 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.05■□□□□ 0.32
PKP4Q99569 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 CLEC4GP1-201ENST00000596555 870 ntBASIC17.05■□□□□ 0.32
PKP4Q99569 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.05■□□□□ 0.32
PKP4Q99569 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.05■□□□□ 0.32
PKP4Q99569 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PKP4Q99569 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PKP4Q99569 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP4Q99569 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
PKP4Q99569 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP4Q99569 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP4Q99569 AC139713.2-201ENST00000641328 2723 ntBASIC17.05■□□□□ 0.32
PKP4Q99569 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PKP4Q99569 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.04■□□□□ 0.32
PKP4Q99569 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP4Q99569 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP4Q99569 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP4Q99569 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.04■□□□□ 0.32
PKP4Q99569 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP4Q99569 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP4Q99569 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.04■□□□□ 0.32
PKP4Q99569 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.04■□□□□ 0.32
PKP4Q99569 AL121772.3-201ENST00000610840 674 ntBASIC17.04■□□□□ 0.32
PKP4Q99569 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP4Q99569 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms