Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 AC140878.1-201ENST00000565277 250 ntBASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 AC017083.2-201ENST00000608069 979 ntBASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 AP001059.3-201ENST00000619053 235 ntBASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 AC018445.3-201ENST00000624177 1945 ntBASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 AC096633.1-201ENST00000422446 749 ntBASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 KRT18P32-201ENST00000424695 1287 ntBASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 AL162274.1-201ENST00000617191 1098 ntBASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD1Q96PZ7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 AC126763.1-201ENST00000552015 2118 ntBASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 AC006116.8-202ENST00000587620 1550 ntBASIC14.77□□□□□ -0.04
CSMD1Q96PZ7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.77□□□□□ -0.05
CSMD1Q96PZ7 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms