Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 AC020916.1-201ENST00000587762 1774 ntBASIC20.73■□□□□ 0.91
NEK1Q96PY6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 AC099336.1-202ENST00000602961 463 ntBASIC20.73■□□□□ 0.91
NEK1Q96PY6 AC114341.1-201ENST00000618070 349 ntBASIC20.73■□□□□ 0.91
NEK1Q96PY6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.73■□□□□ 0.91
NEK1Q96PY6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NEK1Q96PY6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK1Q96PY6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NEK1Q96PY6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK1Q96PY6 AC046185.3-201ENST00000623228 1824 ntBASIC20.71■□□□□ 0.91
NEK1Q96PY6 AC132938.5-201ENST00000624980 1813 ntBASIC20.71■□□□□ 0.91
NEK1Q96PY6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEK1Q96PY6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEK1Q96PY6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEK1Q96PY6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEK1Q96PY6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 KRT18P56-201ENST00000507275 550 ntBASIC20.71■□□□□ 0.91
NEK1Q96PY6 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEK1Q96PY6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEK1Q96PY6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NEK1Q96PY6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEK1Q96PY6 AC080080.1-201ENST00000625121 2420 ntBASIC20.7■□□□□ 0.91
NEK1Q96PY6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NEK1Q96PY6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms