Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 AC012317.2-201ENST00000623305 2251 ntBASIC21.71■■□□□ 1.07
CCDC85AQ96PX6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.7■■□□□ 1.07
CCDC85AQ96PX6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCDC85AQ96PX6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
CCDC85AQ96PX6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 CRYGEP-201ENST00000412192 528 ntBASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85AQ96PX6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 IGHV3-65-201ENST00000523210 341 ntBASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 AC002347.1-201ENST00000569543 541 ntBASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC85AQ96PX6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 AC002558.1-201ENST00000488906 803 ntBASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 AC008667.4-201ENST00000607370 168 ntBASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 AL513190.1-201ENST00000621254 727 ntBASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms