Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX27Q96L92 ELK2BP-201ENST00000415014 1224 ntBASIC18.87■□□□□ 0.61
SNX27Q96L92 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX27Q96L92 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX27Q96L92 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX27Q96L92 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 RPL13AP23-201ENST00000480739 586 ntBASIC18.87■□□□□ 0.61
SNX27Q96L92 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SNX27Q96L92 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.87■□□□□ 0.61
SNX27Q96L92 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.87■□□□□ 0.61
SNX27Q96L92 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.87■□□□□ 0.61
SNX27Q96L92 AL356488.2-201ENST00000602755 427 ntBASIC18.87■□□□□ 0.61
SNX27Q96L92 AL139327.4-201ENST00000612362 153 ntBASIC18.87■□□□□ 0.61
SNX27Q96L92 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX27Q96L92 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SNX27Q96L92 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX27Q96L92 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX27Q96L92 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SNX27Q96L92 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX27Q96L92 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX27Q96L92 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX27Q96L92 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SNX27Q96L92 UPF3AP3-201ENST00000420996 769 ntBASIC18.86■□□□□ 0.61
SNX27Q96L92 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SNX27Q96L92 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX27Q96L92 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.86■□□□□ 0.61
SNX27Q96L92 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX27Q96L92 AC145285.3-201ENST00000564603 959 ntBASIC18.86■□□□□ 0.61
SNX27Q96L92 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX27Q96L92 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SNX27Q96L92 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNX27Q96L92 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX27Q96L92 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 AC046185.3-201ENST00000623228 1824 ntBASIC18.86■□□□□ 0.61
SNX27Q96L92 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNX27Q96L92 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX27Q96L92 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX27Q96L92 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNX27Q96L92 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SNX27Q96L92 AL355312.1-201ENST00000407115 2176 ntBASIC18.85■□□□□ 0.61
SNX27Q96L92 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX27Q96L92 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX27Q96L92 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX27Q96L92 PAWRP1-201ENST00000451083 565 ntBASIC18.85■□□□□ 0.61
SNX27Q96L92 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.85■□□□□ 0.61
SNX27Q96L92 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.85■□□□□ 0.61
SNX27Q96L92 AC136632.2-201ENST00000512891 861 ntBASIC18.85■□□□□ 0.61
SNX27Q96L92 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.85■□□□□ 0.61
SNX27Q96L92 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX27Q96L92 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX27Q96L92 AC020763.4-201ENST00000623414 4170 ntBASIC18.85■□□□□ 0.61
SNX27Q96L92 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX27Q96L92 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX27Q96L92 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX27Q96L92 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX27Q96L92 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX27Q96L92 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX27Q96L92 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SNX27Q96L92 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SNX27Q96L92 AC006504.4-201ENST00000592118 1568 ntBASIC18.85■□□□□ 0.61
SNX27Q96L92 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX27Q96L92 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX27Q96L92 AC097637.2-201ENST00000624096 1997 ntBASIC18.84■□□□□ 0.61
SNX27Q96L92 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX27Q96L92 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX27Q96L92 AC104109.2-201ENST00000602919 1418 ntBASIC18.84■□□□□ 0.61
SNX27Q96L92 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX27Q96L92 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX27Q96L92 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX27Q96L92 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms