Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 MIR5100-201ENST00000579544 119 ntBASIC20.82■□□□□ 0.92
DDX11Q96FC9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 BNIP3P18-201ENST00000593976 575 ntBASIC20.82■□□□□ 0.92
DDX11Q96FC9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DDX11Q96FC9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX11Q96FC9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX11Q96FC9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 AC108860.2-201ENST00000562760 2183 ntBASIC20.8■□□□□ 0.92
DDX11Q96FC9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 AC096582.2-201ENST00000510860 516 ntBASIC20.8■□□□□ 0.92
DDX11Q96FC9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 AC064862.7-201ENST00000604520 867 ntBASIC20.8■□□□□ 0.92
DDX11Q96FC9 AC009154.2-201ENST00000621177 724 ntBASIC20.8■□□□□ 0.92
DDX11Q96FC9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX11Q96FC9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX11Q96FC9 OR6D1P-202ENST00000641007 5290 ntBASIC20.8■□□□□ 0.92
DDX11Q96FC9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms