Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.85■□□□□ 0.45
RTP4Q96DX8 AC091607.1-201ENST00000490318 1060 ntBASIC17.85■□□□□ 0.45
RTP4Q96DX8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTP4Q96DX8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTP4Q96DX8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTP4Q96DX8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTP4Q96DX8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.85■□□□□ 0.45
RTP4Q96DX8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTP4Q96DX8 AC011676.5-201ENST00000624864 2660 ntBASIC17.85■□□□□ 0.45
RTP4Q96DX8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTP4Q96DX8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTP4Q96DX8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.85■□□□□ 0.45
RTP4Q96DX8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.85■□□□□ 0.45
RTP4Q96DX8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTP4Q96DX8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 AC016734.2-201ENST00000624325 1377 ntBASIC17.84■□□□□ 0.45
RTP4Q96DX8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 AC009533.2-201ENST00000543664 586 ntBASIC17.84■□□□□ 0.45
RTP4Q96DX8 AC111152.3-201ENST00000569699 673 ntBASIC17.84■□□□□ 0.45
RTP4Q96DX8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 AP005901.3-202ENST00000581653 237 ntBASIC17.84■□□□□ 0.45
RTP4Q96DX8 AC011467.2-201ENST00000598425 242 ntBASIC17.84■□□□□ 0.45
RTP4Q96DX8 AL121672.3-201ENST00000608644 468 ntBASIC17.84■□□□□ 0.45
RTP4Q96DX8 NPAP1P7-201ENST00000613027 823 ntBASIC17.84■□□□□ 0.45
RTP4Q96DX8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTP4Q96DX8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.84■□□□□ 0.45
RTP4Q96DX8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RTP4Q96DX8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.83■□□□□ 0.45
RTP4Q96DX8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.83■□□□□ 0.45
RTP4Q96DX8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.83■□□□□ 0.45
RTP4Q96DX8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTP4Q96DX8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTP4Q96DX8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTP4Q96DX8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTP4Q96DX8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTP4Q96DX8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTP4Q96DX8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTP4Q96DX8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTP4Q96DX8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.83■□□□□ 0.44
RTP4Q96DX8 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.82■□□□□ 0.44
RTP4Q96DX8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTP4Q96DX8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RTP4Q96DX8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms