Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRNP40Q96DI7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 AC073592.3-201ENST00000625118 1834 ntBASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 AC068137.2-201ENST00000605408 478 ntBASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 REXO1L3P-201ENST00000622202 1288 ntBASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRNP40Q96DI7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 AC009949.1-201ENST00000623048 1830 ntBASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 AC100803.2-201ENST00000562459 1963 ntBASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 AC092474.2-201ENST00000424288 719 ntBASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 AC022145.2-201ENST00000598203 171 ntBASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNRNP40Q96DI7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms