Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 AL138688.1-201ENST00000624851 1594 ntBASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 AL135999.2-201ENST00000622438 1686 ntBASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 NCF1C-201ENST00000438382 1427 ntBASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 KRT18P27-201ENST00000427733 1299 ntBASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 AC139887.3-201ENST00000568585 713 ntBASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 AC008735.5-201ENST00000623544 497 ntBASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ECHDC3Q96DC8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 HCG11-201ENST00000411553 5696 ntBASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 ACTG1P4-201ENST00000425123 1122 ntBASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 AC012640.2-201ENST00000561606 901 ntBASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 AC004706.3-202ENST00000621574 984 ntBASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.48■□□□□ 0.39
ECHDC3Q96DC8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 AC006557.2-201ENST00000592985 1240 ntBASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 AC097637.2-201ENST00000624096 1997 ntBASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.47■□□□□ 0.39
ECHDC3Q96DC8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 AC243591.1-201ENST00000452967 1364 ntBASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms