Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC025678.2-201ENST00000562061 970 ntBASIC21.46■■□□□ 1.03
RPGRQ92834 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.46■■□□□ 1.03
RPGRQ92834 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.46■■□□□ 1.03
RPGRQ92834 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RPGRQ92834 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.46■■□□□ 1.03
RPGRQ92834 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RPGRQ92834 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.46■■□□□ 1.03
RPGRQ92834 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.46■■□□□ 1.03
RPGRQ92834 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RPGRQ92834 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RPGRQ92834 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RPGRQ92834 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RPGRQ92834 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 AL121761.2-201ENST00000598007 1648 ntBASIC21.45■■□□□ 1.02
RPGRQ92834 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.45■■□□□ 1.02
RPGRQ92834 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 AC023141.5-201ENST00000458585 616 ntBASIC21.45■■□□□ 1.02
RPGRQ92834 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.45■■□□□ 1.02
RPGRQ92834 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.45■■□□□ 1.02
RPGRQ92834 HLA-J-203ENST00000494367 1087 ntBASIC21.45■■□□□ 1.02
RPGRQ92834 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.45■■□□□ 1.02
RPGRQ92834 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 ACTL9-202ENST00000612068 1252 ntBASIC21.45■■□□□ 1.02
RPGRQ92834 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.45■■□□□ 1.02
RPGRQ92834 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.45■■□□□ 1.02
RPGRQ92834 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.45■■□□□ 1.02
RPGRQ92834 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
RPGRQ92834 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPGRQ92834 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.45■■□□□ 1.02
RPGRQ92834 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RPGRQ92834 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RPGRQ92834 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RPGRQ92834 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RPGRQ92834 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.44■■□□□ 1.02
RPGRQ92834 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RPGRQ92834 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.44■■□□□ 1.02
RPGRQ92834 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.44■■□□□ 1.02
RPGRQ92834 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.44■■□□□ 1.02
RPGRQ92834 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.44■■□□□ 1.02
RPGRQ92834 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.44■■□□□ 1.02
RPGRQ92834 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RPGRQ92834 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.44■■□□□ 1.02
RPGRQ92834 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPGRQ92834 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPGRQ92834 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.43■■□□□ 1.02
RPGRQ92834 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RPGRQ92834 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.43■■□□□ 1.02
RPGRQ92834 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPGRQ92834 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPGRQ92834 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPGRQ92834 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.43■■□□□ 1.02
RPGRQ92834 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.43■■□□□ 1.02
RPGRQ92834 AC109322.1-201ENST00000524499 1264 ntBASIC21.43■■□□□ 1.02
RPGRQ92834 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
RPGRQ92834 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.43■■□□□ 1.02
RPGRQ92834 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.43■■□□□ 1.02
RPGRQ92834 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.43■■□□□ 1.02
RPGRQ92834 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPGRQ92834 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.43■■□□□ 1.02
RPGRQ92834 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPGRQ92834 AL135999.2-201ENST00000622438 1686 ntBASIC21.43■■□□□ 1.02
RPGRQ92834 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.43■■□□□ 1.02
RPGRQ92834 AC046185.3-201ENST00000623228 1824 ntBASIC21.43■■□□□ 1.02
RPGRQ92834 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RPGRQ92834 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms