Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 AC012306.2-201ENST00000609350 630 ntBASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RPS4Y2Q8TD47 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 RASA4DP-201ENST00000460726 1199 ntBASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 AC097374.2-201ENST00000618617 1306 ntBASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPS4Y2Q8TD47 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 MTCL1P1-201ENST00000446207 792 ntBASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 AL138966.2-201ENST00000621997 464 ntBASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPS4Y2Q8TD47 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms