Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 KLF4P1-201ENST00000412782 1185 ntBASIC18.74■□□□□ 0.59
LMO3Q8TAP4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 KRT16P4-201ENST00000453883 522 ntBASIC18.74■□□□□ 0.59
LMO3Q8TAP4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 AC060834.1-201ENST00000443027 2032 ntBASIC18.74■□□□□ 0.59
LMO3Q8TAP4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.74■□□□□ 0.59
LMO3Q8TAP4 PRORSD1P-202ENST00000563365 2154 ntBASIC18.74■□□□□ 0.59
LMO3Q8TAP4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 AC092053.1-201ENST00000605787 1936 ntBASIC18.73■□□□□ 0.59
LMO3Q8TAP4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 SPDYE21P-201ENST00000413323 827 ntBASIC18.73■□□□□ 0.59
LMO3Q8TAP4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 FOSL1P1-201ENST00000511041 816 ntBASIC18.73■□□□□ 0.59
LMO3Q8TAP4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 AC138894.3-201ENST00000603787 634 ntBASIC18.73■□□□□ 0.59
LMO3Q8TAP4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 AC073592.4-201ENST00000623827 446 ntBASIC18.73■□□□□ 0.59
LMO3Q8TAP4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LMO3Q8TAP4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 HCG4P8-203ENST00000443049 980 ntBASIC18.72■□□□□ 0.59
LMO3Q8TAP4 AC132008.2-207ENST00000454517 770 ntBASIC18.72■□□□□ 0.59
LMO3Q8TAP4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 AL591684.3-201ENST00000605187 298 ntBASIC18.72■□□□□ 0.59
LMO3Q8TAP4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 AP001269.4-201ENST00000609611 512 ntBASIC18.72■□□□□ 0.59
LMO3Q8TAP4 AC009053.2-201ENST00000563701 2365 ntBASIC18.72■□□□□ 0.59
LMO3Q8TAP4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 SIGLEC16-201ENST00000599858 1437 ntBASIC18.72■□□□□ 0.59
LMO3Q8TAP4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
LMO3Q8TAP4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms