Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 AC090340.1-201ENST00000620778 4980 ntBASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 AL353593.2-201ENST00000602529 1483 ntBASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH19Q8TAB3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 MINOS1P3-201ENST00000457048 203 ntBASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 AL691432.3-201ENST00000621860 400 ntBASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH19Q8TAB3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 AC116353.5-201ENST00000638148 1699 ntBASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 RCN1P2-201ENST00000398357 915 ntBASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 AP000867.3-201ENST00000524675 377 ntBASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 AC074051.2-201ENST00000565115 352 ntBASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 STK25P1-201ENST00000585406 838 ntBASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 INTS4P1-201ENST00000438455 1935 ntBASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH19Q8TAB3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDH19Q8TAB3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms